Triplophysa rosa: 130561731
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Entry
130561731 CDS
T09216
Symbol
ddx5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
tros
Triplophysa rosa
Pathway
tros03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130561731 (ddx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tros03041
]
130561731 (ddx5)
03009 Ribosome biogenesis [BR:
tros03009
]
130561731 (ddx5)
Enzymes [BR:
tros01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130561731 (ddx5)
Spliceosome [BR:
tros03041
]
Complex A
U1 snRNP components
U1 related factors
130561731 (ddx5)
Complex B
130561731 (ddx5)
Ribosome biogenesis [BR:
tros03009
]
Eukaryotic type
Pre-60S particles
Helicases
130561731 (ddx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
130561731
NCBI-ProteinID:
XP_057202221
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All DBs
Position
LG11:complement(4620786..4625764)
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AA seq
614 aa
AA seq
DB search
MPGYSDRDRGGRDRGYNSGPPRFGGSRNGPPQGKKFGNPGDRLRKKHWNLDELPKFEKNF
YQEHHEVSRRTPQEVDNYRRSKEITVKGREVPKPIMKFHEASFPNYVMDVIHKQNWTEPT
PIQGQGWPVALSGKDMVGIAQTGSGKTLSYLLPAIVHINHQPFLEHGDGPICLVLAPTRE
LAQQVQQVAADYGKASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEVGKTN
LRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYV
QINVGALQLSANHNILQIVDVCNDGEKEDKLLRLLEEIMSEKENKTIIFVETKRRCDDLT
RRMRRDGWPAMGIHGDKSQQERDWVLNEFKFGKAPILIATDVASRGLDVEDVKFVINYDY
PNNSEDYIHRIGRTARSQKTGTAYTFFTPNNMKQAQDLVSVLREANQAINPKLIQMAEDR
GGRSRGGRGGGFRDDRRDRHTGGRRDFNSYSQDGRNNDSYGQKKTFNSKPQNGSSSYNSG
GNFNGGYGSNGQSNFGGGGQPGGYGNQGYQNQQFGANQGGVQNGMSHPPQFPPFNPQQMP
QSMPFPMPPPAFPQ
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgcccggatattcagacagagaccgcggtggccgcgacagaggatacaacagtggtccc
ccgcgttttggaggtagcagaaatggaccccctcaaggaaagaagtttgggaatccaggt
gaccggctgaggaagaaacactggaacctggatgagcttcccaaatttgagaagaacttt
taccaagagcaccatgaagtttctcggcggacacctcaagaagttgacaattatagaaga
agcaaagaaattacagtgaagggaagagaggtccccaaacccattatgaagttccatgaa
gcaagtttcccaaactacgtgatggatgtgatccacaaacagaactggactgaaccaacc
cccatccaaggtcagggatggccagtagcactaagtggtaaagacatggttggcattgca
cagactggatctgggaaaaccctctcgtacttgctccctgctattgtgcacataaaccac
caaccattcctggaacacggagatggcccgatttgtttggtgttggctcccactcgtgaa
ctggcacagcaggtccagcaggtggcggcagactacggcaaagcttctcggctcaaatcc
acctgcatctacggaggagctcccaagggaccacaaatccgggatctggagaggggtgtt
gaaatctgcattgccactcctggtcgcctcatcgatttcctggaggttggaaagacaaat
ctgcgcagatgcacctatcttgttctagatgaggctgacaggatgctggacatgggtttt
gaaccccagattcgaaaaattgtggaccaaattagaccagaccgacagactctgatgtgg
agcgccacatggccaaaagaggtgcggcagctggccgaagactttcttaaagagtatgtg
cagatcaacgttggtgccctgcagctcagcgccaatcacaacatcctacagattgttgat
gtttgcaacgatggcgaaaaagaggacaagctgctgcgccttttggaggaaatcatgagt
gaaaaggagaataagactataatttttgtcgagaccaaaagaaggtgtgatgatctcacc
aggagaatgcgcagggatgggtggcctgcgatgggtatccatggagacaagagccagcag
gaaagggactgggttctcaatgagtttaaattcggcaaagcccccatcctcatcgccaca
gacgttgcctccagaggcctagatgttgaggatgtcaaatttgtcattaactatgactac
cccaacaattctgaggactacattcaccgcattggccgtacggctcgcagccagaaaact
gggaccgcctacacattctttacaccaaacaacatgaaacaggcacaggacctcgtctct
gtcctccgtgaggccaatcaagccattaaccccaaactcatccagatggccgaagacaga
ggaggtcgttcaaggggaggtcgaggtggagggtttagagatgaccgtcgtgatcgccac
actggcggcagacgggatttcaacagctatagccaagacggccgcaacaatgactcttat
ggacagaagaaaacgtttaacagtaagcctcaaaacgggtctagcagttataacagcggt
ggaaattttaacgggggttacggcagtaatggacagtcaaacttcggtggtggcggtcag
cctggcggctatggaaaccaaggttatcagaaccagcagtttggtgccaaccaagggggc
gttcagaatggcatgagccaccccccacagttccccccctttaacccccaacagatgcca
cagtctatgccctttcccatgccccctcctgcattcccacagtaa
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