Triplophysa rosa: 130561792
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Entry
130561792 CDS
T09216
Symbol
smurf1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
tros
Triplophysa rosa
Pathway
tros04120
Ubiquitin mediated proteolysis
tros04137
Mitophagy - animal
tros04144
Endocytosis
tros04340
Hedgehog signaling pathway
tros04350
TGF-beta signaling pathway
tros04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130561792 (smurf1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
130561792 (smurf1)
04350 TGF-beta signaling pathway
130561792 (smurf1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
130561792 (smurf1)
04137 Mitophagy - animal
130561792 (smurf1)
09144 Cellular community - eukaryotes
04520 Adherens junction
130561792 (smurf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130561792 (smurf1)
04121 Ubiquitin system [BR:
tros04121
]
130561792 (smurf1)
03029 Mitochondrial biogenesis [BR:
tros03029
]
130561792 (smurf1)
Enzymes [BR:
tros01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
130561792 (smurf1)
Membrane trafficking [BR:
tros04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
130561792 (smurf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
130561792 (smurf1)
Ubiquitin system [BR:
tros04121
]
Ubiquitin ligases (E3)
HECT type E3
130561792 (smurf1)
Mitochondrial biogenesis [BR:
tros03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
130561792 (smurf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
130561792
NCBI-ProteinID:
XP_057202347
LinkDB
All DBs
Position
LG11:complement(16449577..16497670)
Genome browser
AA seq
731 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVKSTLDP
KWNQHYDLYIGKADSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCK
LNPSDSDAVRGQIVVSLQTRDRIGSGGPVVDCRGLVENEGPVFEDSGPGRPLSCFMEEPM
PYTDPTGAAGGGNCRALESPNQEQRIQAQRNRNQDSRGHAHTPQNRPHGHQSPDLPEGYE
QRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVSCEELGPLPPGWEIRSTVSGRIYFVDH
NNRTTQFTDPRLHHIMSQHTQVKESSQALPVQMEVGVEEGDGELPVRYERDLVQKLKVLR
HELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVARE
WLYLLCHEMLNPYYGLFQYSTDNIYTLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYI
NGGFTLPFYKQLLGKPIQLCDLETVDPELHKSLVWILENDITSVLDHTFCVEHNAFGKFL
QHELKPNGKNIPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDNK
ELELIIGGLGKIDLNDWKANTRLKHCVADSNIVKWFWQAVESFDEERRGRLLQFVTGSTR
VPLQGFKALQGSTGSAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLT
AVEETCGFAVE
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcctggcactcgaaggaacgggtcaagcatcaaaatccgactgacagtatta
tgtgccaagaatctggcaaagaaagacttcttccggttgcctgatcctttcgctaaagtg
gtggtggacggctcaggtcaatgccactctacagacacggtcaaaagcacgttggacccc
aagtggaatcagcattatgacctgtatattgggaaggcagattccatcaccattagcgtg
tggaaccataagaagatccataagaagcaaggggcgggtttcctaggctgcgtgcgactc
ctctccaatgccatcagcagactcaaagacacgggctaccagcgtttagacttatgcaag
ttaaacccgtctgacagtgatgctgtacgtggacagatcgttgtgagtctgcagaccaga
gacagaattggcagtggtgggcctgtggttgactgtagagggctggttgagaatgaaggg
cctgtctttgaagactcggggcccggccggcctctcagctgtttcatggaggagcccatg
ccctacacagatcccacaggggccgccggtggtgggaactgccgggcactcgagtcgccc
aatcaagagcaaagaatccaagcacaacgtaacagaaaccaggattccagaggacacgcg
cacaccccccaaaatcgaccacatggacaccagtcccccgacctccccgagggctacgaa
caaaggaccacagtgcagggccaggtctattttttgcacacacagaccggcgtgagcacc
tggcacgatcccagaataccccgggatttgaacagcgtgagctgtgaggagctgggtcct
ttgccgcccggctgggagatcaggagcactgtgtcaggaagaatatattttgtggaccac
aataatagaaccacacaattcaccgacccgaggttacaccacatcatgagccagcacact
caggtgaaagagtcgagccaggctctaccggtgcagatggaggtcggtgtggaggagggt
gatggagagttaccggtgcgctacgagagagatctggtccagaaactgaaagttctccgt
cacgagctctccctgcagcagcctcaggccggacactgccgcatagaagtgtcccgcgag
gagatctttgaggagtcttacagacagatcatgaagatgagacccaaagatctgaagaag
cgtctgatggtgaagtttcggggagaggaggggctggattacggtggagttgctagggag
tggctttatctcctctgtcatgagatgctgaatccatactacggcttgttccagtactct
actgataacatctacacactacagataaacccagactcatccatcaatcctgatcatttg
tcttacttccactttgtcgggaggattatgggtctggctgtgttccacgggcactacatc
aatggaggcttcacgttgcccttctacaaacagctcctagggaagcccatccagctttgt
gaccttgagactgtggacccagagctgcacaagagcctcgtgtggattctagagaatgac
atcacgtccgttctggaccacacgttctgtgtagaacataatgctttcggcaagttcctc
cagcacgagcttaaaccaaacggcaagaacatcccagtcacagaggagaacaagaaagaa
tatgtgaggctgtatgtcaactggaggtttatgcgaggcattgaggcccagttcctcgcc
cttcagaagggcttcaacgaactcatcccacagcatctgctcaagccttttgacaacaag
gaacttgagctcatcattggtggtttggggaagatcgatctgaacgactggaaggccaac
acgcggctgaagcattgtgtggctgacagtaacattgtgaagtggttctggcaggcggtt
gaatcgtttgatgaggagagaagaggccggctgctgcagtttgtcactggctcaacgcgt
gtccctctacaaggattcaaagcgctgcaaggttctacaggttctgcaggaccaagactc
ttcactattcatttaattgatgccaacacagataatctgcctaaagcccacacgtgcttc
aaccggatcgacatcccgccttacgagtcatacgagaagctctatgagaagctcctgaca
gccgtggaggagacgtgcggctttgcagtggagtga
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