Triplophysa rosa: 130561859
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Entry
130561859 CDS
T09216
Symbol
abca3b
Name
(RefSeq) phospholipid-transporting ATPase ABCA3
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
tros
Triplophysa rosa
Pathway
tros02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
130561859 (abca3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tros02000
]
130561859 (abca3b)
Transporters [BR:
tros02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
130561859 (abca3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
AAA_23
AAA_22
RsgA_GTPase
SRP54
AAA_30
AAA_29
Cas6_I-A
Motif
Other DBs
NCBI-GeneID:
130561859
NCBI-ProteinID:
XP_057202451
LinkDB
All DBs
Position
LG11:complement(3081981..3111018)
Genome browser
AA seq
1705 aa
AA seq
DB search
MAVWQQFGLLLWKNYIHQKRQILVTVVEIALPLLFSAILIILRQKVSSTTYPNATHYHSF
SVNGLPGEVCFKDLAYVPANASVVRQIAEDVKESLKWRISSVRGFETEEQFEAFVKTDPH
SSGILAAVVFEHKFSHDDEPLPLQVAYHLRFSYSPRNAPAREKSEFNPNNDMDWHTLRLF
PLFQLPGPREQHDAPGGTPGYFREGFLHVQHAVDRAIMKSYNSTAASALLSQTHVRLSRF
PYPPFIYDVFILAIQNQLPLLLVLSFTYTSLNIVRAVVQEKERKLKEYMRMMGLSNWLHW
SAWFLMFFLFLSISIFFITLLCCIKVSPNGAVLTYSDPTLVFVFLLVFAVSTINFSFMVS
VFFSRANVAAAAGGFIYFLSYLPYLFLWPRYDLLSHAQKVSACLISNVAMAMGTQLIGMF
EGKGTGIQWSNMFESVTVDDDFSLAQVLGLLLLDAVMYGLVAWYVEAVFPGEYGVPLPWY
FFILSSYWCSSPRVAFLKEKEEEEDAEKALKGEFIEEVPAGLVSGVKIKHLTKVFRMGKK
DKEAVRDLTLNMYEGQITVLLGHNGAGKTTTLSMLTGLFPPSSGRAYINGYDICQDMTLI
RRSLGLCPQHDVLFDNLTVREHLLFYTQLKGFPRQKIPDEVERIIRILNLEDKRDARSKT
LSGGMKRKLSIGIALIGDSKVVMLDEPTSGMDPSARRATWDLLQGEKRGRTILLTTHFMD
EADLLGDRIAIMAGGELQCCGSPLFLKNKYGAGYHMVIVKDAFCNVSEITHLVHMYVPNA
TLESCAGAELSYILPKESTSRFELLFAELEMNREELGIASYGASVTTMEEVFLRVGKLVD
SSLDIQAIQLPALQYQHERRSHDWTTDDSSSASGMTDVTDFTDSGTLISEDGSNIKLNTG
ARLYLQQFYAMFLKRALYSWRNWKVIVAQFLVPLIFIVLALVVARTLPGGHSTPQLRLSL
SQYGPTHVPVALEADAGPLAEALAEVYTTQLASQNAIAATNITDLSDYVLYNAVREGGAF
NERCVVGAALCKSRSHTEMIGYFNNQGYHTPATALMLVDNALYKLLAGPNASIQTGNFPM
PRNMSEIAQSQLSEGQTGFAIAINLMYGMASLASTFALLLVSERSVKSKHVQRVSGVYLS
NFWFSALLWDLINFLLPCLLMLVVFRAFSVEAFVAENHLVDVLLLLLLYGWAVIPLMYLL
SFLFSSAATAYTRLTIFNIISGTATFLAVIIMTIPELHLQDLSHILDKVFLLFPNYCLGM
SFCQFYQNYEFITFCTSSAMAEYVCKYYNVTFQVNYFSMEEPGVGRFLVAMSLQGVVFIG
LLLLMELQCIHTLMNLCRGRKKFMLVAEEALQSEDRDVAEERKRVLECQPVVESMVGSPL
ILQELRKVYSGGPSLLAVDRLSLAVGKGECFGLLGFNGAGKTTTFKMLTGDESITSGDAF
IDGYSILRDVKKVQQRIGYCPQFDAVLDHMTGRETLSMYARLRGIPEKYVSACIENVLRS
LLLEPHADKLVRSYSGGNKRKLSAGIALIGGPPVIFLDEPSTGMDPVARRLLWDAITRTR
ESGKAIIITSHSMEECEALCTRLAVMVNGQFKCLGSPQHLKSKFGSGYTLLAKVHTEGDL
GEMDLQLFKDFVQNTFPGSLLKDEHQGMVHYHLTDKTLTWAQVFGVLETAKEKYRIEDYC
VSQISLEQVFLSFAQFQHYSDDRWK
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgtggcaacagttcggactgcttctctggaagaactacatccatcaaaagcgt
cagatcctggtcacggtggtggagatcgctctgcctctgctcttctcagccatcctgatc
atactgcgtcagaaggtttcctccactacctaccctaatgcaacacactaccacagcttc
tccgtcaatggcctgccgggcgaggtctgcttcaaggacctggcgtacgtgccggccaat
gccagcgtggtgcgtcagatcgccgaggacgttaaggagagcttgaagtggcgcatcagt
tccgtccgtggctttgaaacggaggaacagttcgaggcgtttgtgaagacagacccacat
tcaagcggcattttggcggcggttgtgttcgagcacaaattcagccatgatgatgagcct
cttcccctgcaggttgcctatcatctacgcttctcgtacagccctcgaaacgctccggct
cgtgagaaatccgagtttaatccaaacaatgacatggactggcacaccctccgcctcttc
cctcttttccagcttccggggcccagggaacagcacgacgctcccgggggtaccccaggt
tatttccgtgagggcttcctgcacgtgcagcatgcggtggacagagccatcatgaagtcc
tataacagcacagcagcctcggccctcctcagtcaaactcatgtgcggctctcccgcttc
ccctacccgccgttcatctacgacgtcttcatcctggccatacagaaccagctgcccctg
ctcctcgtgttgagcttcacgtacacgtctctgaacatcgtccgcgccgtggtgcaggag
aaagagaggaaactcaaggagtacatgcgcatgatgggtctcagtaactggctgcattgg
agtgcatggttcctcatgttcttcctcttcctgtccatctccatcttcttcatcactctg
ctctgctgtatcaaggtgagtcctaacggagcagtgttgacgtatagtgacccgacgctg
gtgttcgtctttctgctggtgtttgctgtgtccaccatcaacttcagcttcatggtcagc
gtgttcttctccagagcgaacgttgccgcagcagcgggcggcttcatctacttcctcagc
tacctgccgtatctcttcctgtggccccgctatgacctcctgtcacacgcccagaaagtc
tccgcctgcctcatctccaatgtggccatggccatgggtacccagcttatcggcatgttc
gagggcaaagggacgggcatccagtggtctaacatgtttgagtcggtaacagtggacgat
gacttttctctggctcaggtgctcggactgcttctgctggacgccgtgatgtacggcctg
gtagcctggtacgtggaagcggtattccccggagagtacggagtccctctgccgtggtat
ttcttcattctgtcgtcgtactggtgcagtagtcctcgcgtggcctttctgaaagagaaa
gaggaggaggaagatgccgagaaggctctgaagggcgagtttatcgaggaagtgccagct
ggactggtgtcaggggtcaaaatcaaacatttgacaaaggtgttcagaatgggcaagaag
gacaaagaggcagtgagagatctaacactcaacatgtatgaaggtcagatcacagtcctg
ctgggtcacaacggagctggaaagaccaccacactgtctatgctgacaggtctgttcccg
cccagcagcggccgtgcatacattaacggttatgatatatgtcaggacatgactctgatc
cgtcgcagtctgggtttgtgtcctcagcacgacgtgctcttcgacaatctcaccgtccga
gaacatctgctgttttacacacagctgaagggtttccctcgccaaaagatcccagatgag
gttgagcgcatcatccgtattcttaacctggaagacaagcgggacgccaggtccaagacc
ctctcgggaggaatgaagagaaagctttccatcggcatcgctctcatcggagactctaag
gtagtgatgctggacgagcccacctcgggtatggacccttccgcccgacgggccacctgg
gacctgcttcagggcgagaagcgcggccgtaccatcctgctcaccacgcatttcatggac
gaagccgatctgctcggagaccggatcgccatcatggccggcggagaactgcagtgctgc
ggctcgccactctttcttaaaaacaaatacggtgcgggttatcacatggtgatcgtcaaa
gacgcattttgtaacgtgtcggagatcacacatctggtccacatgtatgtgcccaacgcc
actctagagagctgtgccggagctgagctgtcctacatactgcctaaagagagcaccagc
cggtttgagctgctgtttgccgagctggagatgaatcgagaggagttgggcatcgccagc
tatggagcgtcggtcaccaccatggaggaagtttttctgagggtcggcaagctcgtggac
tccagtttggacattcaggccattcagcttcctgctcttcagtatcagcatgagcgcagg
tcacatgactggacgacggatgactccagcagtgctagcggtatgaccgacgtgacggat
ttcacagacagcggcactttaatttcagaagacggctccaacatcaaactcaacacaggg
gcccgactctacctgcagcagttctacgcaatgttcctgaagagggcgctgtacagctgg
aggaactggaaagtgattgtggctcagtttttggtgccgctcattttcatcgtgttggcg
ctggtggtggcccgcactcttcccggcggccacagcacccctcagctccgcctgtcactg
tcacagtacggccctacacacgtgcccgtggctctcgaagcagatgccggcccgctggcc
gaagccctggctgaggtctacaccacacagctggcgtcccagaacgccatagccgccact
aatataacagatctgtcagattatgtgctgtataatgctgtgagagagggcggcgctttt
aacgaacgctgtgtggtgggtgctgctctctgcaaatccaggagtcacaccgagatgatc
ggatacttcaacaatcagggctatcacacccccgccacggccctcatgctggtggacaac
gctctttacaaactgctggctggacccaacgcctccatccagaccggaaatttccccatg
ccccgtaacatgtccgaaatcgcccagagccagctttcagagggtcagacaggtttcgcc
atcgctataaacctcatgtacggtatggcgtctttagccagcaccttcgctctgctcctg
gtgtcggagcgctctgtgaagtccaagcacgtgcagcgggtcagcggggtctacctctct
aacttctggttctctgctctgctctgggatctcatcaacttcctgttgccctgtctgctc
atgctggttgtgttccgagcgttttccgttgaagcgtttgtggcagagaaccacctggtg
gatgttctgctgttgttgctgttgtatggatgggccgtgatcccactcatgtatctgctc
agctttctgttctcctcggccgccaccgcttacacgcgcctcaccatcttcaacatcatc
agcggcacggccacgttcctcgccgtcatcatcatgaccatacccgagcttcatctgcaa
gacctctctcacatcctggataaagtcttcctgctcttcccaaactactgcctgggaatg
tccttctgccagttctaccagaactacgagttcatcaccttctgcacctccagcgcgatg
gcggagtacgtctgcaagtattacaacgttacatttcaagtgaactacttctccatggag
gagcccggcgtgggacgcttcctggtggccatgtcgctgcagggcgtggtcttcatcggc
ctgctcctcctcatggagctccagtgcatccacaccctcatgaacctctgcaggggacgc
aagaagttcatgctggtggcagaagaggctcttcagtctgaggacagagacgtggctgag
gagaggaagagagttttggagtgtcagccggtggtcgagtccatggtgggcagcccgctc
atcctgcaggagctcagaaaggtgtactcaggtgggccgtcgctgttggcagtggaccgc
ttatccttggccgtcgggaagggcgagtgtttcggtttgctggggtttaacggtgcgggg
aagaccacgacgttcaaaatgctgaccggagatgaaagcatcacatcaggagatgccttc
atcgatggttacagcatcctccgagacgtgaaaaaggttcaacagaggatcggctactgc
cctcagtttgacgcggtgttggatcacatgacgggacgggagaccctaagcatgtacgcc
agactgaggggcattccggagaagtacgtgtccgcctgcatcgaaaacgtcctgcgctcg
ctgctgctcgaacctcacgctgacaaactcgtccgcagctacagcggtggtaataagagg
aagttgagcgcaggcatcgctctgatcggagggccccctgtgatctttctggacgagccg
tcgacaggcatggaccccgtggccagacgcctgctgtgggacgcgataacacgcacccgt
gagtcgggaaaagccatcattataacctcacacagtatggaggaatgcgaggcgttgtgt
acgcggctggccgtcatggtgaacgggcagttcaagtgtctgggcagcccgcagcatctg
aagagtaaatttggaagcggttacacactgttggcaaaggttcacacggagggagattta
ggagaaatggatcttcagctctttaaagactttgttcaaaacacctttccaggaagttta
ctgaaggacgaacatcagggaatggttcactaccacttaaccgataaaaccctcacctgg
gcacaggtgtttggggttctggaaacagccaaagagaagtatcgtatcgaggattactgc
gtcagtcagatctctctggagcaggtgtttctcagcttcgctcagtttcagcattactct
gacgaccgctggaaatga
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integrated database retrieval system
