Triplophysa rosa: 130561910
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Entry
130561910 CDS
T09216
Symbol
mgrn1b
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1b isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
tros
Triplophysa rosa
Pathway
tros04120
Ubiquitin mediated proteolysis
tros04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130561910 (mgrn1b)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
130561910 (mgrn1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tros04121
]
130561910 (mgrn1b)
Enzymes [BR:
tros01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130561910 (mgrn1b)
Ubiquitin system [BR:
tros04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130561910 (mgrn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
130561910
NCBI-ProteinID:
XP_057202542
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Position
LG11:complement(19191110..19200634)
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AA seq
582 aa
AA seq
DB search
MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFAGHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKEDADSPTDEGVKPRALYGV
EFTFDSDARVAITIYCQAFEEFLNGMAIYSPKSPVLVSETVYYKRGVSQQFTLPSFKIDF
SEWKEEDLNFELDRGVFPMVIQAVVDEGDDCLGHAHVLLAAFERHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENKNNQETKPSDDENSDNSNECVVCLSDLRDTLILPCRHLCLCNSC
ADTLRYQANNCPICRLPFRALLQIRAVRRKPGTLSPVSFSPVLAQSMDHDEHSSSDSVPP
GFEPISLLEALNGLGAVSPGIPSAPLYDEINFSGSLSGESRQLSSPEHSGDSGGQKSKVS
KSPDRTLTLQQPVSISGSVLVLSHTSASCFDSLSSDCSTLRSPSSPIQEEDEEKLSEMSD
AQAHMLLSSSPAPTEGTAEDDAPDSLSPEDGDGLNLDEEAMNDCSSEHSSFTKTESDPPE
DLSLQGLSGSSESLSTQSTCCSSQPLLGASSHLHMEDEELDV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgggttcaattcttagtcgaaggattgcaggtgttgaggatatcgacatccaggctaat
tctgcttatagatatcctcccaaatcaggaaattattttgctggccactttttcatgggt
ggagagaagtttgacacccctcatccagagggatatcttttcggggaaaacatggatctc
aactttcttggcaaccgtcctgtgcagtttccctatgttactccagccccccatgagcca
gtcaaaacattgagaagtctggtcaatatcagaaaagactcattacgattagtcagatat
aaagaggatgctgattctcctactgatgaaggagtaaaaccaagggccttgtatggagta
gagttcacattcgattcagatgctcgagtggccataacaatctactgtcaggcttttgag
gagttcttgaatggcatggcaatatacagccctaaaagccctgtactggtctctgagact
gtatattacaaaagaggagttagccagcagtttactctaccatccttcaagattgatttc
tctgagtggaaggaagaagacttgaactttgaactggacagaggcgtctttcctatggtg
attcaggctgtagttgatgaaggagacgattgtttgggtcatgcgcatgtactgctggca
gcgtttgaaagacatgttgatggcagcttctcagtgaagcctttgaaacagaaacaaata
gtggatcgtgttagttacttattgcaggagatttatgggattgagaacaagaacaatcaa
gagacaaagccgtctgatgatgagaacagtgacaacagcaatgagtgtgtggtgtgtctg
tcggatctacgggacaccctgattttgccttgcaggcacttgtgtctgtgtaactcctgc
gctgacactctacgctaccaggccaacaactgccccatctgtcgcttaccgtttagggcg
cttcttcagatccgagctgtgagaaggaaacccggaacgctttctcccgtttccttcagc
ccagttctggctcagagcatggaccatgatgagcattcaagttccgattctgttcctcct
ggctttgagcccatctccctcctggaggctctgaacgggctcggcgccgtgtcccccggc
atcccgtccgcccccctgtacgacgagatcaacttctctgggagtctgagcggagaaagc
agacagctcagttcacccgagcactctggagacagcggaggacagaagagtaaagtcagc
aagtcaccggatagaacattgactctacaacagcctgtcagtatctcaggaagcgtgctt
gtattgagtcatacttcagcttcctgttttgacagtctctcatctgactgcagcactctg
cgctctccttcgtctcccattcaagaggaggatgaagagaaactgtccgagatgtctgac
gcacaggctcacatgctgctctccagtagccccgcccccactgagggtactgcagaggat
gatgctcctgactctctgtctcctgaagacggggatggactgaatctggacgaagaagcc
atgaatgactgtagcagcgagcacagcagctttaccaaaactgaaagtgatcctcccgaa
gatctgtccctccagggattgtcaggttcatcagaaagtctgagcactcagagcacctgc
tgctccagtcagccgcttctgggggcttcaagccatttgcacatggaggatgaagaactg
gatgtttaa
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integrated database retrieval system
