Triplophysa rosa: 130562034
Help
Entry
130562034 CDS
T09216
Symbol
cdhr5a
Name
(RefSeq) cadherin-related family member 5 isoform X1
KO
K16505
cadherin-related family member 5
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tros04515
]
130562034 (cdhr5a)
Cell adhesion molecules [BR:
tros04515
]
Cadherins
Cadherin related
130562034 (cdhr5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
PDR_assoc
Glycophorin_A
Motif
Other DBs
NCBI-GeneID:
130562034
NCBI-ProteinID:
XP_057202813
LinkDB
All DBs
Position
LG1:complement(36727297..36734398)
Genome browser
AA seq
705 aa
AA seq
DB search
MDTTLKHKSINAVLACVLVSFFHKICFADKICTVLSEPVIIKENNTADTVLVRINTMAKD
VTLNITENPGNVFYLKGLDLMVKKGLDFETLLGPEELTVQVRCNKTGFRSTTLTVLVRVE
NINDNPPTFDKSEYTLDVNELTPVNSSIGTIEATDEDSEVLYYTMEPTVNRYFRLESMYT
PKILVNKVLDYDVVQQVKLILYVQDTPPPGHPGELSFTASATIIINIKDTDNRPPWFQPC
TRVTLGNAKLCLSLGYKGRVNLTEKQDGALQLQPGPVYARDGDKSRNEEISYKIVKGNED
NMFQIDENSGNITMLKPADVAGPISLLVLASQVSNRDQFATTTVTIDVKKKSRNPPRFEK
ERYEAYVYSNSGPENMVLRDRTSNRPFRIRARDEDFAGGINPDVRYEVQYSSYVNITTDG
FLLLKKAVRTDSFALQLRAVDVSTGESGTSTLSVVVLPSVGVQSTEETYRAGDMALLGFV
MAALLVLCLIVIGYLISRVKKGNPDAFKLSECLGPFLKYTQPPNRPRPRDSMQFTNDGFL
NEGDTGRSRSRRAEMRDRRPDPAQTGSVRAIPRERQRHCSSCGVQVHGNHKHHSSPAVQS
RARQSKNKVTSILAKERRRDDRQKTVWFKESEDSSDIEVEIIPDNIGFKSEKDGEKAEAD
FTSPPSEDGEMELGEITTLNTQDLSSRERAISDSRDGLNTEKQDQ
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggacacgacattaaaacacaaatccataaatgctgtgcttgcctgtgtgcttgtgtca
ttctttcacaaaatctgctttgctgataaaatttgtacagtcctatcagagcctgtcata
attaaagagaacaacacagccgacactgttcttgtccgtattaacaccatggcaaaggat
gtcacgctgaatatcacagagaatcctgggaatgtattttatctgaaaggtttagacctg
atggtaaagaaaggcctggactttgaaactcttttaggtcctgaagaactaactgttcaa
gttcgatgtaataaaactggcttcagaagtactactctgaccgtgcttgttcgcgttgag
aatatcaatgacaaccctcctacatttgacaagagcgagtatacacttgatgtaaatgag
cttacaccagttaattctagcattggtacaattgaagccacagatgaagattcagaggtt
ctgtattacacgatggaaccaacagtgaacaggtactttcgactggagtccatgtatacc
cccaaaatcctcgtgaacaaagttttagattatgatgtcgtccaacaggtcaaactgata
ttgtatgttcaggatactccacctcctggacatccgggtgaattgtctttcacagcctcg
gcgaccatcatcatcaatataaaagacaccgacaaccgtcctccatggtttcagccatgt
acaagggtaactcttggtaacgccaaactctgcctaagtttgggctacaaaggaagagtc
aatttaacagagaaacaggacggagccctgcagttgcagccgggtccggtgtatgccaga
gatggagataaaagcagaaatgaagagataagctataaaatagttaaaggaaatgaagac
aatatgtttcagattgatgaaaactctggcaacatcaccatgttgaagccggcagatgta
gccggtcccatatcgctcttagtattggcctcccaggtatcaaacagagaccagtttgcc
accactacagtcaccattgacgtcaagaaaaagagcagaaatcctccacggtttgagaag
gaacgatatgaagcgtatgtttacagtaattcaggccctgaaaacatggtgctacgggac
cggacatcaaacagacccttcagaatccgagcgagggatgaagatttcgcaggtggaatc
aatcctgatgttagatatgaagtccaatatagcagctatgttaatatcacaacagacggg
tttttacttctcaagaaagcagttcgcacagattcctttgctttgcagcttcgggcggtt
gatgtgtccactggtgagtcggggacatccacactttctgtggttgtgttaccatcggtg
ggggtccagtcgaccgaagagacttaccgcgccggagacatggctctgctgggtttcgtg
atggccgctctgctggtgctgtgcctcatcgtgattggctatctcatatcccgcgtcaag
aaggggaatcctgacgcgttcaagttgtctgagtgtttagggccattcttgaagtatact
cagccccctaacaggccaaggccaagagatagcatgcagttcaccaatgatggtttctta
aatgaaggggacacggggagatccaggtccagacgtgccgaaatgagagatcggagaccg
gatccggctcagacgggcagtgtgcgagcgatacctcgcgagagacagaggcactgtagc
tcctgcggtgtccaggtacatggcaaccacaaacaccacagcagccctgctgttcagtcc
agagcaaggcagagtaaaaataaggtcacgtctattctggctaaagagaggaggagagac
gacagacaaaagacagtgtggtttaaggagagcgaggattcttctgatatcgaggtggag
atcattccagacaatattggatttaagtctgaaaaggacggggagaaggcagaggcggat
ttcacttccccgccgtcggaagacggtgaaatggaattgggggaaataactacgttgaat
acacaggacttgagtagcagggaaagggctatttctgatagcagagatggactgaacaca
gaaaaacaagatcagtga
DBGET
integrated database retrieval system
