Triplophysa rosa: 130562212
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Entry
130562212 CDS
T09216
Symbol
mex3b
Name
(RefSeq) RNA-binding protein MEX3B
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tros03019
]
130562212 (mex3b)
04121 Ubiquitin system [BR:
tros04121
]
130562212 (mex3b)
Enzymes [BR:
tros01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130562212 (mex3b)
Messenger RNA biogenesis [BR:
tros03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
130562212 (mex3b)
Ubiquitin system [BR:
tros04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130562212 (mex3b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
zf-RING_2
zf-C3HC4
RING_XB3-XBAT31
KH_2
zf-C3HC4_2
KH_DEAH11_2nd
Prok-RING_4
zf-RING_UBOX
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
130562212
NCBI-ProteinID:
XP_057203084
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Position
LG1:3475666..3479563
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AA seq
530 aa
AA seq
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MPSSVFADMERNGGGQGDALDDQRALQIALDQLSSLGLDNDENFLYDNEPRKKSVNMTEC
VPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRREDVAMARREIIS
AAEHFSMIRASRNKNSSLNGTATVPGPPNLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQ
QQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHIAMRTGGLIEFTDENDFHANGTD
VGFDLHGNASLWSKPNSSVTPTSGRKPFSNYRNDSSSSLGSASTDSYFGNNSSSRLADYS
PPSPALSYTASSNSNNNNNNINANGNGFVYGSEAISPDCADLPFESSPGFDPSPTPPGLM
WSQYERSTATKSAIFSDKASTNANGLMASQRRANGTRLSPPLHQANGVSEHPLERRVRSD
PGGGTLSFPGYSPNGLSNGIAALSGSHHRGVPSDSSISSSSSSSSSSSSGTSRKGSRDCS
VCFESEVIAALVPCGHNLFCMECANRICERNEPKCPVCHAAVTQAIRIFS
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atgcccagttcggtgttcgcggacatggagcgcaacggcggcgggcagggggacgccctg
gacgaccagagagccctgcagatcgcgctggaccagctctcgtcactcggactggataac
gatgaaaatttcttgtacgacaacgagcccaggaaaaagagcgtcaacatgaccgaatgc
gttcccgttcccagctccgagcacgttgcggagatcgtcgggaggcaaggttgcaaaatt
aaagccctgcgagcaaagaccaatacgtatatcaaaactccggtgcggggagaggagccg
gtctttgttgtaacgggcaggcgggaggacgtagccatggctaggagggagatcatctct
gccgccgagcacttctccatgatcagagcgtcgcggaacaaaaacagcagtctgaacggg
accgccaccgtacccggtccgcccaatctgcccgggcagactaccattcaggtgcgggtt
ccctaccgggtggtggggctggtggtgggacccaagggggccaccatcaagcgcatccag
cagcagacacacacctacattgtcacgcccagccgggacaaagagcccgtgtttgaggtg
acgggcatgcccgagaacgtggaccgggccagggaggagatcgaagcacacatcgccatg
cgcacgggtggcctgatcgaattcacggacgagaacgacttccacgccaacggcacagat
gtgggtttcgacctgcacgggaatgccagtctgtggagcaagcccaactccagcgtcacg
cccacctcgggtcgcaagcctttctccaattaccgcaacgacagctccagttctctgggg
agtgcctctaccgattcctactttggcaacaacagcagctcccggctggccgattacagc
cccccaagccccgccctcagctatactgcctccagtaatagcaacaacaacaataacaat
atcaacgcgaacggcaacgggttcgtctatggcagcgaggccatctcgcccgattgcgcc
gatctgcccttcgagtcctcgccgggattcgacccctcccccacgccgccgggcctgatg
tggtcgcagtacgagcgcagcaccgccaccaagtctgccattttctctgacaaggcttcc
accaatgccaacgggctgatggccagccagcggagggccaacggcaccaggttgtccccg
cccctgcaccaagccaacggcgtctcggagcatccgctggagcgccgggtgcgcagcgat
ccgggtgggggcaccctcagcttccccggctactccccgaacgggctgtccaacggcatc
gcggccctctcgggatcccatcaccggggtgtgccctctgactcctccatctcctcatcc
tcttcgtcgtcctcttcctcctcgtccgggacgagccgcaagggcagccgggactgctcg
gtgtgtttcgaaagcgaggtgatcgcggccctggtgccctgcggccacaacctgttctgc
atggagtgtgccaaccgcatctgcgagaggaacgagcccaaatgccccgtctgccacgct
gcagttactcaggctatacgtatattttcttaa
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