Triplophysa rosa: 130562375
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Entry
130562375 CDS
T09216
Symbol
trim35-30
Name
(RefSeq) tripartite motif containing 35-30
KO
K12012
tripartite motif-containing protein 35
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tros04121
]
130562375 (trim35-30)
Ubiquitin system [BR:
tros04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130562375 (trim35-30)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_4
zf-C3HC4_2
zf-RING_5
zf-RING_2
U-box
zf-Nse
DUF4200
zf-RING_10
DUF1140
Sina_RING
Motif
Other DBs
NCBI-GeneID:
130562375
NCBI-ProteinID:
XP_057203262
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All DBs
Position
LG12:22364193..22368585
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AA seq
470 aa
AA seq
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MACRESLTEEDFYCPICCDIFRDPVLLACSHSICKGCVQAFWSRRGFRECPICRAVSSNP
DPPLNIMLRNMCVLMREETTPEPPVETVDSCSLHGETLAYFCFEDQEPVCGKCKNTELHK
NHRIRSTKHASQDLRRERHLKLQALHEKLGAYKASNQSWHETDEYIKRQSQQAETQIKEA
FEMLHQFLQNDETARITALREEEEQKRQIIKKKTEEIRSEMLSLSRIIESIEEQLGKTDF
TFLANYKATVERTQCTLQNQKIPSGVLIDVAKHVCNITFEVSKNLQHIIRYTPVTLDPNT
AHAYLLLSDDLTSLLHTGELNQQLPANPERFVGYTSVLGSEGFNSGSHYWDIEVGGSTAW
AVGVITESAYKNRKNPSKTGLWYVGYSNGRYGKGCCPEILTVLRVSQRIQEIRVQLDWNK
GKVIFTDVRRNVGLHVFKHTFTERVFPYFYNHSLQPLRIIPVKTSVRTDI
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggcttgtagagaatctctcacagaggaggatttctactgccccatctgctgtgatatc
tttagagatccagttctcctagcctgctctcacagcatctgcaagggatgcgtacaagcc
ttctggagccggagagggtttcgagagtgtcccatctgcagagctgtctcctccaacccc
gacccacccctaaacatcatgctgaggaacatgtgtgttctgatgagagaagaaacaact
ccggaacctcctgtggaaacggtggactcttgcagccttcatggagaaactctagcttac
ttctgcttcgaagatcaagaaccagtctgtggaaaatgcaaaaacaccgaactgcataag
aaccatcgcattcgttcaacaaagcacgcatcgcaggacctcaggcgggagcgtcacttg
aaactacaggctcttcacgagaaactgggagcctataaagcatcaaaccagtcgtggcat
gaaacagacgagtacattaaaaggcagagccaacaggccgaaactcaaatcaaagaggcg
tttgaaatgcttcaccagtttctccagaatgacgagacggccaggattactgcgctgaga
gaggaggaggagcagaagagacagatcattaaaaagaagaccgaggagattagatctgag
atgttatctctttcacgcattattgagtccatcgaggaacagctagggaagactgacttt
acatttcttgcgaattacaaggcaactgttgaaaggacacagtgtacactgcagaatcaa
aaaatcccctcaggagtgctgatcgatgtcgcaaagcatgtgtgtaacataacctttgaa
gtgtcaaagaatctacaacacatcatccgatacacgccagttactcttgatcccaacacg
gcacatgcttatctgctcttgtcagatgatctgaccagtctccttcacaccggtgagctc
aaccagcagcttccagcgaacccagagaggtttgtaggctacacaagcgttcttggttct
gaaggcttcaactcaggatctcattactgggacatcgaggtaggaggcagcacagcttgg
gctgtgggggtgatcacggagtctgcatacaagaaccggaagaatccttccaagacaggc
ttgtggtatgtgggttactctaatggtagatatgggaagggctgttgtcctgagattctg
actgttcttcgggtgagccagagaatccaggagatcagagtacagttggactggaacaaa
ggaaaagtgatcttcaccgatgtgaggcgtaatgtcggcttgcatgttttcaaacacact
ttcacagagagagtttttccgtacttttataatcattctctacagccgctgagaatcata
ccagtaaagacatctgtgagaacggacatttag
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