Triplophysa rosa: 130562407
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Entry
130562407 CDS
T09216
Symbol
slc24a1
Name
(RefSeq) sodium/potassium/calcium exchanger 1 isoform X1
KO
K13749
solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
Organism
tros
Triplophysa rosa
Pathway
tros04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
130562407 (slc24a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tros02000
]
130562407 (slc24a1)
Transporters [BR:
tros02000
]
Solute carrier family (SLC)
SLC24: Na+/(Ca2+-K+) exchanger
130562407 (slc24a1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_Ca_ex
NOA36
Motif
Other DBs
NCBI-GeneID:
130562407
NCBI-ProteinID:
XP_057203322
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Position
LG12:complement(17520978..17529876)
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AA seq
725 aa
AA seq
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MFLTRRKRLHLSRIIFLLSGVFLCSLYQLTIRAKLPEPWPEPQIAENTDEGSGQTLVGLL
EEIGVSILTDVQPKHTDEVRPSDKPRTSAPTKIPTTTEPPTTTTNRTIIQCIFVDPNLPK
PTPVPTPSITIANTTASTPGDAPHMKGEYPEDIFSIEERRKGWVLLHIFGMVYMFVSFAI
VCDEFFVPTLGVITYKLEISDDVAGATFMAAGGSAPELFTSLIGVFISHSNVGIGTIVGS
AVFNILFVIGMCALFSREMLHLTWWPLFRDVSFYILDLIMLIIFFLDNYIMWWESMMLVG
GYVLYVFFMKFNVQIERAVKTQLMKHKNIVKVIAVEEPEKDNGTSGEENRAPEPDDKNRL
KLKPTLQRGGSSASLHNSTMRNTIFQLMIHTLDPLGEESVLNGGAKARSSLECKVKFKDK
AQILNSMARGKVENKKKEKSGEVGDPTDQPKDSDDTSPAAKEGEGNQKTETPKERDAAAG
GGSENPGGTDDSDSSEEDDSDEDSDDDEENEDEAAEGDNDEPLSLEWPDTRRKQATYLFL
LPIVFPLWLTVPDVRNPASKKFFVITFLGSIVWIAIFSYLMVWWAHQVGETIGISEEIMG
LTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITMGLPVPWLMFSFCHSFAPV
QVSSNGLFCAIVLLFLMLLFVTISIAACKWRMNKVLGSIMFVLYFVFLVISVMLEDRIIV
CPVSI
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgactcgacgaaagagactccatctgagccggattatatttcttctctctggt
gttttcctgtgttccttataccagctgacaattagagccaaactaccagaaccctggcca
gaacctcagattgcggagaacactgatgaaggttctggacaaactctagtgggactgttg
gaggagataggggttagtattttaactgatgttcagccaaaacacacggatgaggtccga
ccgtcagacaaacctaggacttcagcccccacaaaaatacccacaactacagagccacct
acaacaaccacaaacaggacgatcatccagtgcatctttgtcgacccaaaccttccgaaa
cccactcccgttcccactccatcaatcactattgccaacactacagcttccactcctgga
gatgcaccacacatgaagggcgagtacccggaggacatcttctccattgaggagcgacgt
aaaggctgggttcttctccacatctttggaatggtatacatgtttgtttcgtttgccatt
gtgtgcgatgagttctttgtcccgacgctgggggttatcacatacaaactggaaatttca
gatgatgtggcaggggctactttcatggctgctggaggctctgctcctgagctcttcaca
tccttgatcggtgtcttcatctcgcatagcaatgttggcattggaaccattgttggctcg
gctgtctttaatattttatttgtgattggaatgtgtgcgctgttctcccgggaaatgctt
cacctcacctggtggcctctgtttcgggacgtgtcgttctacatcctcgatctcatcatg
ctcattatcttctttttggacaactacattatgtggtgggagagtatgatgctggtgggt
ggttatgttctctatgttttcttcatgaagttcaacgtacagattgagcgagcagttaag
actcagctcatgaaacacaagaatatcgtcaaggtgattgcggtggaagaaccagagaag
gacaatgggacctcaggtgaagaaaacagggcacctgaaccagacgacaagaatcgatta
aagctaaagcccacattgcagcgcgggggcagttctgcttctctgcacaacagcaccatg
agaaacaccatcttccagctgatgattcacacacttgatcctctaggagaagagtcagtg
ttaaatggcggtgcaaaggctagaagctctttggaatgtaaagtgaaatttaaagacaag
gctcagattttgaacagcatggcccgggggaaggtagagaacaaaaagaaggaaaaatcg
ggtgaagttggtgatccaacagaccagcccaaggattcggatgacacaagtcctgcagca
aaggaaggagaagggaatcagaagactgagacgccaaaggaaagagacgctgcggcggga
ggtggatcagagaatccaggaggcacggacgactctgacagcagtgaggaggatgacagt
gatgaagacagcgatgacgatgaagaaaacgaagatgaagctgcagagggagacaatgat
gaacctctgtccttagagtggccagacaccagacgtaaacaggctacatatttgtttctg
ctgcccatcgtcttcccactgtggctcacagttccagacgtcagaaaccctgcatctaag
aagttcttcgtcatcactttccttggctcgatagtctggattgctatattctcttacctt
atggtgtggtgggcacatcaggtgggtgagaccattggcatttcagaggagatcatgggt
cttacgatcctggcagcaggaacatccattcctgatctaataaccagcgtgattgttgct
cgaaaaggcttgggagacatggcggtctccagctctgtaggcagcaacatttttgacatc
accatggggttgccggtgccctggctgatgttctcgttctgccattcatttgctccggtg
caggtgagcagtaacgggctcttctgtgccatcgtactgctcttcctcatgctcctcttt
gtcactatttccatcgctgcctgtaagtggaggatgaataaagtgttgggatccatcatg
ttcgttctctacttcgtgttcctggtgatcagtgtgatgctagaagaccgaatcatcgtg
tgtcccgtgtccatctga
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