Triplophysa rosa: 130562418
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Entry
130562418 CDS
T09216
Symbol
dhx36
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
tros
Triplophysa rosa
Pathway
tros03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130562418 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tros03019
]
130562418 (dhx36)
03012 Translation factors [BR:
tros03012
]
130562418 (dhx36)
Enzymes [BR:
tros01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
130562418 (dhx36)
Messenger RNA biogenesis [BR:
tros03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
130562418 (dhx36)
Translation factors [BR:
tros03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
130562418 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_22
nSTAND3
AAA_19
NPHP3_N
AAA_14
NB-ARC
Rad17
ABC_tran
TsaE
ATPase_2
PhoH
DUF7428
AAA_34
Motif
Other DBs
NCBI-GeneID:
130562418
NCBI-ProteinID:
XP_057203350
LinkDB
All DBs
Position
LG12:complement(11596769..11630449)
Genome browser
AA seq
1020 aa
AA seq
DB search
MSYGHGNRRGRRGGGGGRRFGDGSRWDAEAGPSGGGYQRNSVWDSKEVRGHGVGRRGGGG
RGKHPPHLKGRDIGLWYAKFGGIGRSEAERNSRAVVQMDASREQHITRLLNSVQREPHSD
SLPSTSKNRSVKEEPGSHSYFDGDPPESQNNLRLPKTEPKEEKQDNELGTSVKTGLDCEK
DLQYLCHYVPRQPSLDEELKKDLREKIDNQRYLDMLKFREQLPSYEMKEELVRLIAENQV
LVITGETGCGKTTQVSQLILDNYIQKGMGSLCRVVCTQPRPISAISVAERVAAERAESVG
DEKSCGYQIRLQSKLPRKQGSVLYCTTGIILQWLRSDPYLSSISHLVLDEVHERSLQSDV
LLTIVKDLLRSREDLKIVLMSATLNAEKFSRYFDNCPMVHIPGYTYPVEEFLLEDVVEML
RFKPQQRQEHRPRHRRGFMHGQNVRQEKEQKEAEYRESWPCYTRTLRERYSDSTIDALEM
MDEDDKINLELIVALIRHIVRNEDNGAILVFLPGWDNISSLNDLLMADQMFKSDRFKIIP
LHSLMPTVSQTQVFKKPPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNI
STMTAEWVSLANAKQRKGRAGRVAPGKCYHLYNGLRASLLDNYQLPEIQRTPLEELCLQI
KILKLGPIAVFLRRCVDPPSERAIELAITHLIDLNALHRNEELTPLGFHLARLPVEPHIG
KMILFGALLGCLDPVLTIATSLSFKDPFFIPLGKEKIADHKRKTLSRNSKSDHITVVNAF
RGWEDAKRQGGRSEREYCWDNFLSANTLQMLQNMKGQFAEHLLAAGFVNCKDPKDPSSNI
NSENEKLIKAVIVAGLYPKVAKIRPSNSSKRHMVPKVSTKADGKVCIHPKSVNAEETQFS
YTWLIYHLKMRTTSIFLYDCTEVSPFSLLFFGGDISIQKDKDQETIAVDEWIVFQSPARI
AHLVKDLRKELDVLLEDKIKKPQPVDWNDRQSKDCAVISAIIDLITTQESPAGGSRRGSY
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgagttacgggcatggtaacagacgcgggcgaagaggaggaggaggaggccgacggttc
ggagatgggtccaggtgggatgcagaggctggacccagcggaggaggataccaaagaaac
tctgtatgggactcaaaggaagttcggggacatggagtggggcgaagaggaggaggcgga
cgaggcaaacaccccccccatctaaagggtcgagatatagggctgtggtatgccaaattt
ggaggcattggaagatctgaggcagagagaaactctagggctgtcgttcagatggatgca
tcacgtgagcagcacatcactaggttgttgaactctgtccagagagagccacacagcgac
tccctaccctccacatccaaaaaccggagtgtgaaggaggagcccggcagccacagttac
tttgatggagatcctccagaatctcagaataatctgagactgccaaaaactgagcccaag
gaggagaagcaggataacgagttggggacaagtgtgaaaactggactcgactgtgaaaag
gatctgcagtacttatgccattatgttccgcgtcaaccctccctggacgaggagctcaag
aaagatctgcgggagaaaattgacaaccaaagataccttgatatgctgaaattcagagaa
cagctgccatcgtatgaaatgaaagaggagctggttaggctgatcgctgaaaaccaggtt
ttggttatcactggagagactggctgtggaaagaccacccaggtaagtcagctcatcctg
gataattacatccagaaggggatgggctctctttgccgggtggtctgcacccagccacgt
cctatcagtgccatatcagtagcagagagagtagctgcagagcgtgcagaatcggtagga
gatgagaagtcttgtgggtatcagattcgtctgcagagcaagttaccacggaaacaaggc
tcggtgttgtattgtacgacgggcattattcttcaatggctccgctcggatccgtatctc
tccagtataagtcatctggtcctggatgaggttcacgagaggagtcttcagtctgatgtt
cttctcaccatcgtgaaagacctgttacgtagtcgggaagacctcaaaatagtcctcatg
agtgccacgctcaatgctgaaaaattcagcagatatttcgataactgtcccatggttcat
attcctggatacacatacccagtggaagagtttttactggaggatgtggtggaaatgtta
agattcaagccacagcagcgacaggagcatagacctcgccacaggagaggatttatgcac
ggccagaatgtacggcaggagaaagagcagaaagaggctgaataccgcgagagctggccc
tgctacacccgcacgctccgagagcggtattcagacagcaccatcgacgcattggagatg
atggatgaagatgacaagatcaatctggagcttatcgtggcattgatccggcatatcgtg
aggaacgaggataatggagcgattctagtgttcttgcctggctgggacaacatcagctcc
ctgaatgatctgcttatggctgaccagatgtttaaatcagacagatttaaaataatcccc
cttcactctttgatgcccacggtgtctcagactcaggtgttcaaaaagccgcctccggga
gttcgcaagattgtgatcgcgaccaacatcgcagaaaccagcatcacgatagatgatgtc
gtgtacgtgatcgacggagggaagattaaagaaactcattttgacacacagaacaacatc
agcaccatgactgcagagtgggtgagcttagccaacgccaaacagaggaagggtcgcgct
ggcagggtggctcctgggaaatgctaccacctgtataatggattgagggccagcctcctc
gataactaccagctaccggagatccagcgtaccccattggaagagctttgcttgcaaata
aagatcttaaagttgggccccattgctgtattcttgcggagatgtgtggaccctccctca
gagagagccatagagctggctatcacacacctgatagacctgaatgctctgcaccgcaat
gaagagttgaccccgttgggatttcatctcgcccgtttgccggtggagcctcacattgga
aaaatgattctgtttggggctcttctaggctgtttggacccagtgcttaccatcgcaacc
agcctaagctttaaagatcccttcttcataccgctggggaaggagaagattgcagaccac
aagagaaaaaccctctctagaaactccaagagtgatcatattactgttgtcaatgctttt
aggggctgggaggatgctaagagacagggcggcaggtctgaacgtgaatactgctgggac
aacttcctgtctgccaacacactacagatgcttcagaacatgaaaggtcagtttgcggag
catcttttggcggctggatttgtgaattgcaaggaccctaaagatcccagctctaacata
aactcagagaatgagaagctgataaaggcggtgatcgtggcaggcctgtaccctaaagta
gccaagattcgccccagcaacagtagcaagagacacatggtgccaaaagtgtccactaaa
gctgatgggaaagtttgcatccatcctaagtccgtgaatgcagaagaaactcagttcagc
tacacatggctcatctatcacctgaagatgagaaccacaagtatcttcttgtatgactgt
acggaggtgtcaccattttcactgctgttctttggcggagatataagcatacagaaggac
aaggaccaagagaccatcgccgttgacgagtggatcgtcttccagtccccggcacgcatc
gctcaccttgttaaagacctgaggaaggagctagatgtattactggaggataaaataaag
aaaccccaacctgtggactggaatgaccggcaatcgaaagactgtgctgtcatttcggcc
atcatcgaccttataacaacacaggaaagtccagctggaggatctaggaggggcagctat
tga
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