Triplophysa rosa: 130562420
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Entry
130562420 CDS
T09216
Symbol
irf2bp1
Name
(RefSeq) interferon regulatory factor 2-binding protein 1
KO
K22383
interferon regulatory factor 2-binding protein
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tros03000
]
130562420 (irf2bp1)
04121 Ubiquitin system [BR:
tros04121
]
130562420 (irf2bp1)
Transcription factors [BR:
tros03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
130562420 (irf2bp1)
Ubiquitin system [BR:
tros04121
]
Ubiquitin ligases (E3)
Atypical E3
130562420 (irf2bp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
RING_XB3-XBAT31
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
130562420
NCBI-ProteinID:
XP_057203356
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All DBs
Position
LG12:complement(8652601..8656759)
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AA seq
613 aa
AA seq
DB search
MSSSSQASSRRQWCYLCDLPKMPWAMIWDFSEAVCRGCVNYEGADRIELLIDTARQLKRT
HVMQDGRSPGPQPGGKHGPGGKEGPMEAGRPPSERYERGRGEYVSARLPNGLPRLEDGGP
PEVSRQSPNARRTMVGAVPPNLMAQGLVGAPHGLLTAMPGLNARAGSAPLTISAPMLNEI
SKRQALGMSMGMSVASFMNPEFEKELKEKQRNVEALGELSESTRHRADDWAGRPKAVRDA
LHTLSGCTPFNVRFKKDHVLVGRVLAFDAKHMLEFELKVFTEYPCGSGNMFSSILGLVKQ
MFHDSQKDTGKVINSGYKYVEYEKRHGTGDWRLLSELLSDAVRAFKDAPLPETLPQPYLD
ASCTVPPAFIGRPTQSRVRRRKASPELDSAERMATDAWAMSAYPVMPAHMPATSLAGAGQ
LPTLQEGIGAHSSDPSPITALMSVADNVGTTTQSSKDAPGGSGAHSNVGRQNSSSPSPGG
QRRLASRNGEPSASSSSGGLATTVTVPLACGGDQGSVTGGEASGGGGAPLCCTICHERLE
DTHFVQCPSVPGHKFCFPCTRDFIRRQGSGSEVYCPSGEKCPLVGSNVPWAFMQGEISTI
LAGDVKVKKERDP
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcttcctcgcaggcgtcttccaggcggcaatggtgctacctatgcgacttgccg
aagatgccttgggccatgatctgggacttcagcgaggcggtgtgtagagggtgtgtgaac
tacgagggagcggacagaatagagctgctcattgacacagcccgacagctaaagagaacc
catgtgatgcaggacggcagatctccgggtccacagcccggtggtaaacacggtcccggt
ggtaaggagggtcctatggaggcaggcagaccgccctccgagcgttatgagaggggtagg
ggagagtatgtgtccgcccgactgccaaacgggctgcctagactagaagatggtggtcct
ccggaggtcagcagacagagtcctaatgccagaaggactatggtaggggctgtgccaccc
aatttaatggctcaggggctcgttggagcccctcatggcctgttgacggcaatgcctggt
ctgaatgccagagctggcagtgcccccttgaccatttctgctcctatgttaaacgagatc
agtaaaaggcaggccctgggcatgagcatgggcatgagcgtggcgtctttcatgaaccct
gagtttgaaaaagagctgaaggagaagcagagaaacgtggaggcgctgggcgagctttcc
gaaagcacgaggcaccgcgcagacgactgggccggacgtcctaaagctgttcgggacgct
ttgcacaccctctccggttgcacccctttcaacgttcgttttaaaaaggaccacgtcctg
gtggggagagtgcttgctttcgatgccaagcacatgctcgagtttgagctgaaagtcttc
acagagtacccgtgtggatctggcaacatgttctccagcatattagggttagtcaagcag
atgttccacgactctcagaaagacacaggcaaagtcatcaactcgggctacaagtatgtg
gagtatgagaaaagacacggcactggcgactggcgtctcctttccgagcttctcagcgat
gcggtacgggcgttcaaagatgctccgctccccgaaaccctgccgcagccgtacctggat
gccagctgcaccgtgccacccgccttcataggccgccccacgcagtccagagtacgcaga
cgtaaagcttcgcccgagctggacagcgctgagaggatggccaccgacgcctgggctatg
agtgcgtaccctgttatgcccgcccacatgcccgccacctcactggctggtgccggacaa
cttcccaccctccaagagggcataggagctcacagtagtgacccgtctcctatcacagcg
ctcatgagcgtggcagataacgtcggcacgaccacccagtcttcaaaagatgccccgggc
ggtagcggtgctcactccaacgtaggccgccagaacagctccagtccctcacctggaggt
cagcgacgcctggcctcacgcaacggagaaccttcagccagcagcagttcgggagggctg
gccacgaccgtcactgtgcccctcgcttgcggaggtgaccaaggttccgtcacgggtggt
gaagcctcgggaggaggaggtgctcctttgtgttgtaccatctgccatgagcgtctggaa
gacacgcacttcgtccagtgtccatcggtgccgggacataaattctgtttcccctgcacc
cgggacttcatccgcagacagggctcggggagcgaggtgtactgcccaagtggagagaag
tgccctcttgtgggctccaatgtgccgtgggcgttcatgcaaggtgagatctccaccatc
ctggcaggagatgtgaaggtgaaaaaggaaagagacccataa
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