Triplophysa rosa: 130562442
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Entry
130562442 CDS
T09216
Name
(RefSeq) protocadherin-15 isoform X1
KO
K16505
cadherin-related family member 5
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tros04515
]
130562442
Cell adhesion molecules [BR:
tros04515
]
Cadherins
Cadherin related
130562442
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Fibulin_C
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
130562442
NCBI-ProteinID:
XP_057203404
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Position
LG12:complement(22584825..22594362)
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AA seq
793 aa
AA seq
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MVLKLIFCHLPLWRILMFCHLLSAFSWSSVMAGECDGGHSEFVTVRENSMRGTLITNLSF
SADPSTNHIKLRLSGKDSDWFYLEGKTVRLNSSSNRILDREVHDSVLTATVKCYEHETLQ
AEHRVVVEVLNENDNRPEFLQSSVQPVEISELTAVNAVAFTVQATDADGDTLTYIIDEIS
PDAAYFRVDLPNSGRVILNKSLDYESKTHLQLTLYVVESNTKDHYNTTATLIINITDGDD
QYPQFQPCILLSAKHSSRICANPVYTANITENDQDIVLDFFPGPIQAVDGDKALRTTLTY
AILSGADNGRFVIDSHSGEVRLTRRVDNRLLTPTFRLRVMAAQVDDLLKYAVATVLVRVL
AENRYPPQFNRSAYRGFVRESTSPASLVMTYGNTLLTLQAVDQDFSDVFNPRLQYSLKSE
NSSRLFYITQEGLLIARSNQLHPNHKYFLEVVATDLESGDTVYASLQVGVLQKGQPVPHG
PLGAGPPDDIETVGRTEGVAGVCLILLAIALFMLAWCLRTRRDPAIRASVAESKHPNVTL
KWFQLVNHGRPMPLVDESFYHNEAFSGYDSSTSPFYGKQGIYTKTEEPLASSVNLPSVTL
NMPHMDPGSPAPRPNGGPANRSSCKTVSFGDFVTVLECHTESGVEENTEAKASLQTEKEI
CTDLEIQVNTGSGITKDESLTGFNTESHRIADCDKSESEMFKARLKRAITDHDTISSDPI
EVETGVQVRTNPEDITNQHTTNLEMQSSTKKVVSEELREGVLHHDPQKNDTATQSLMSQD
VTQAESPVSKDLH
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggtcttgaagttgatcttctgtcatctgccattatggaggattctaatgttctgtcac
cttctgtctgcattcagctggagctctgtaatggccggtgaatgtgacgggggtcacagt
gagtttgtgacggtcagagagaacagcatgaggggaactctcatcaccaacctcagcttc
tctgctgatccatcgaccaatcacataaagttaagactttccgggaaggattctgattgg
ttctatctggaggggaaaaccgtacgactgaactcgtcgtcaaacaggattcttgatcga
gaggtgcacgactcggttttaacagcaactgtaaagtgttatgaacacgagaccttacaa
gctgaacaccgggtcgtggtggaggtgttgaacgagaatgacaacaggccagagttccta
cagagctcagtacagcctgtggagatcagtgagctgacagcagtgaacgctgtagcgttt
acagtccaggccacagatgctgatggagacacgctcacatacatcattgacgaaatatct
cctgacgccgcttattttcgtgtggacttgcccaacagcggcagagtgattctcaacaaa
tcactggactatgaaagcaaaactcatctgcagctcactctttatgtcgtggagtcgaac
accaaggatcactacaatacgacagccacattaatcatcaacataacagatggagatgac
caatacccacaattccagccgtgtattctcctctcagccaaacacagcagccgtatatgt
gccaatcctgtgtacactgccaacatcaccgagaatgaccaggacattgtcttggacttt
ttcccgggtccgattcaagctgttgatggtgacaaggctctgagaacgacactgacctat
gccatcctttcaggggcggataatgggagatttgtcattgacagtcattctggagaggtg
aggctaaccagacgcgtggacaaccgactgctgaccccgacattcagactgcgtgtcatg
gccgctcaggtggacgaccttctcaagtacgcggttgccacggttcttgtgagggttcta
gcagagaacagatatccgccccagttcaatcgctcagcgtaccgtgggtttgtgagggag
agcacaagccccgcctctctcgtcatgacatacggcaacacattactcacactgcaggcc
gtggatcaggacttcagcgatgtcttcaatcccagacttcagtattctctaaagtcagaa
aacagctctcggctgttttacattacacaagagggactactcatcgccagatccaaccag
ctacatcccaaccacaaatactttctggaggttgtagccactgatctagagtcaggggat
actgtttacgcctcattacaagtgggtgttcttcagaaaggccagccagttcctcatggt
cctttaggggcagggcctcctgatgatattgagacagtgggcaggacagagggcgtggca
ggggtgtgtcttatcttactggccattgccctattcatgctggcgtggtgcttaaggacg
agacgggaccctgccatacgtgccagtgtggcagagagcaaacatcctaatgtgaccctg
aaatggtttcagctggtgaaccacgggaggccgatgcccctagtggacgaatcgttctat
cacaatgaggctttcagtgggtacgacagctccacatcacctttttatggcaaacagggc
atctacaccaaaacagaggaaccactagcatcatctgtgaacttaccatcagttacccta
aacatgcctcacatggatccgggatctccagcgccacggcccaacggagggccagcgaac
agatccagctgtaaaactgtgtcgtttggtgatttcgttacggtcctagaatgtcatacg
gagagtggggtggaagaaaatacagaagctaaagcatcactccaaacagagaaagagatc
tgcactgatttagagatacaagtaaatactggttcaggtatcacaaaagatgaaagccta
acaggatttaacacagaatcacatagaatcgcagattgtgacaagtcagaatcagagatg
tttaaggcacgattaaaaagagccatcacagaccatgacacaatatcaagtgacccaata
gaagtagaaactggtgtgcaagtccgtacaaaccctgaggatataacaaaccaacataca
acaaatctggagatgcagagctctaccaaaaaagtggtttctgaagagttacgagaagga
gttttacatcacgatccacaaaaaaacgatacagccacacaaagcttaatgtcacaagat
gtcacgcaagcagaatctccagtttcaaaagacctacattga
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