Triplophysa rosa: 130562459
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Entry
130562459 CDS
T09216
Symbol
nlrc5
Name
(RefSeq) NLR family, CARD domain containing 5
KO
K22615
NLR family CARD domain containing 5
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tros04054
]
130562459 (nlrc5)
Pattern recognition receptors [BR:
tros04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
130562459 (nlrc5)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_14
LRR_4
AAA_16
Atypical_Card
Motif
Other DBs
NCBI-GeneID:
130562459
NCBI-ProteinID:
XP_057203449
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All DBs
Position
LG12:complement(18097392..18115916)
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AA seq
1758 aa
AA seq
DB search
MRMESVECVGDVQAVVAQEASALVDLLCELDTSVLNQILALVEPRTQDQLRSLANTRDRV
LAVIDYFKTSDCTTCRQFLRTVLHYCENIPFFLETTLVSIAENTSEANFNHTSDTDTSSP
SHNVKRQRLDYLQSYTDALKSTLLQKHESVIQSVVKDIRLDDTWVYLRHRNPNKTKDRTA
HVSPDHQDGEDTSLEHKVSVESLLKTSGRLLVLLGQAGSGKTLLVHCLGQRWVDGAFPSI
HLLFLLEFRQLNLMSRDLSLKELLFLFYPPSEHFKEQTEAVFAFLFSNPEKVCFILDGYD
EFRSKFTNPEKLDSAIDPNKPMPMPDLLSGLCNHKILPNCTVLVTCRPRDVTDMFGSPGF
ITCELMGFDRLGVKEYAEQYFHKKGDEFKQKAVNLLMDNRHLLSMCHVPGLCHICCVCMD
YLFSSVGDHGNPQLPISLTQIYIQILSAFLSRSSGGQLSGISMLQRYKIKIIEMSQLALS
GLEKGTLVFMATEVSPELQDFGVRTGILSRVKLTREDGSSGYGFTFMHLTMQEFLAAINL
MTSKSITESQLKKKLNLKTRWTTKTDPKSVFTDSLHLYVCGLAAEACTLSLVQLKETDGA
TTWVRKRQAAVRDFLRSLAGSASQTGPKIVELCRCVHETQDAKLARAVGSRPQFELRNIR
LNAVDMEALAFVTAAADQTVCLDFGGCSIDLDCLEILPSFKNVDHLIFRSRKYDDKFAEA
LCGILRELQALRQLDLISGGLTDVGAAKLARALQDCPHITHINVSDNSLRDDGIRDIAEV
LSRLPNTSSIVMGKNNISTDGVLMLTEMMTVCPSVQEFYVEGNKEINISFSKSSDTTCEN
MDLNQTKEAKNITLKQCNITCAHVASLSTKLKGFITVLDLSNNSLGNKGIKKILDLMPKL
GMIQEINVSKNGVDMDGLVLLVSALCTQRNLRRVDASANGKDKLVLWFDTSKRLSKQPAP
NETGLHLHKKLSLTHSEIQPPYMTKLFKQLVKCENLLDIEFSHLKLSNETVEKLMLILPE
MSSLQLLNLSHVDMSTNGALSLVRSLVDCQRVTAVELRHQAEAFIKFVPVKAEAAICRLM
EYKLNRTNVEKLSRILEDCPHLAELDLSHNLLRDEGVKCFVDCLPKLKISSSVSLNGNRM
TQLGALHLVNSMNTCEKVVAVEVSLGVEDQSLIQFVQEHVNGKTLRLKECSFEVNHLQQL
VEILKRCPRLLTLELSSSLLHDQGLFSLLDCLAKLSTIQTVKLRNNGLSLEQIEYFLKQL
SCYRQHRDIRIEELCLTGSAVVSLVSNCLNLESQIEEIRVNRACINVIIDANSSLHSTSV
THSENRDFPLCTLRSISFNDCDTEGHHLTPLIPPMQKCHSLQNLKFSQLKMDRKGVEFFS
VVIPSLVSLKNLSLDLKGTAEDEVAVLVEALPKTQTIETVSLSQLVLNDSGAAVFGRALQ
NLPHLKSLSLLQCSGWTAARGCDLVRGLVQCLSLAEIRINSLVLNEEGISILAKGLCSMA
SLRKLSLNNIRVETSETFVNGTGILCLLASFQEFRQMEEIELESWRMGDSGTHELVKHIS
SWTELRNINLSNNNISDEVGEMLVEALSRCTVLQKLQLSKNRLGQACAAKLSQVFPLLTQ
ISDLDLSENQFGQKGTLALCEGLDNMKALKRLNLTSIGSSDLVGVASSLKHCPAIEDVSL
SWNECGDTLAWKLAEVLPLCTMLKRLDLEANKISTKGAVEISKCLPSCKSIEVIRLWRNP
VAKDDENLKDQRLNFSSV
NT seq
5277 nt
NT seq
+upstream
nt +downstream
nt
atgaggatggagagcgtggaatgtgtgggggacgttcaggctgtggtggcccaggaggct
agtgctttagtggacttgctttgtgagctggacaccagtgttctgaatcagattttggct
ttggtggaacctaggacacaggaccagctacgctcactggcaaatactagagatcgtgtt
ttagctgttatagattacttcaagacttcagactgtaccacatgtagacagtttcttcgc
actgtattgcactactgtgaaaacattcctttttttcttgaaaccacactggtgtccata
gcagaaaatacatctgaagcaaactttaatcacacgagcgacactgatacttcttcacca
tcacataatgtgaaacgtcaacgactggattatttacagagttacaccgatgctctgaaa
tccacgctactgcagaagcacgagtcagtgatacaatccgttgtaaaagacatccgtctg
gatgacacgtgggtgtatttaaggcacaggaaccccaacaaaacaaaagataggaccgct
catgtttctcctgaccaccaggatggagaagatacttcattggaacataaagtgtcagtt
gagtctcttctgaaaacctctgggagacttcttgtgcttctgggtcaggctggatctggt
aagaccttgttggtgcactgcctcggccaaaggtgggttgatggcgccttcccatccatt
cacttgctattcctgctggagtttcggcagcttaacctcatgtcaagagacttgtcctta
aaagaactgctgtttctcttctaccctccgagcgaacactttaaggagcaaaccgaagcc
gtgtttgcattcctcttctccaaccctgagaaggtctgcttcatactcgacggctacgat
gagtttcgatccaagtttacgaatccggaaaagcttgatagtgccattgacccaaacaaa
cccatgcccatgccagatctcctctctggattgtgcaatcataaaatccttccgaattgc
actgtgttggtcacctgtaggccacgggatgtgacggacatgttcgggagccctggtttc
ataacatgcgaactgatggggtttgaccgactgggtgtgaaggagtatgctgagcagtac
ttccacaaaaaaggagatgaatttaagcagaaggctgtaaacttgttgatggacaatcgt
catcttctgtcaatgtgtcatgttcctgggctctgtcatatctgctgtgtatgtatggat
tatctgttctccagtgttggagatcatggtaatccacagctacctatatccctaacccaa
atttacattcagatcttgtctgcatttcttagccgctccagtgggggtcagttgtctggc
atatctatgctgcaaagatacaaaataaaaataatcgagatgagccagttggctctttca
gggctcgagaaaggcacactagtcttcatggctacagaagtttctccagaactccaggat
tttggtgtcagaactgggatcctgtcccgtgtgaagctgacgcgtgaggatggatcttca
gggtatggtttcaccttcatgcaccttactatgcaggagttcctcgccgctatcaatctc
atgaccagtaaaagcatcacagagagtcagcttaagaagaaacttaacttgaaaacccgc
tggacaaccaagactgatcctaaatctgtcttcactgattctctccatctttacgtgtgt
ggtcttgcggctgaggcgtgcacccttagtctggtccagctgaaagagacagatggtgcc
acgacttgggtacgaaagcgccaagccgcggtacgggactttttacgctctttagcagga
agtgcaagtcaaactggccccaaaatcgttgagctgtgtcgatgtgttcatgagacacaa
gatgctaagttggcaagggctgttggttcaagaccccagtttgaactgcgaaatatcaga
ctcaatgctgttgacatggaggctctggcatttgtaacagcagctgcagatcagactgtg
tgtttggactttggtggctgttccattgatcttgattgtttggaaattctgcctagtttt
aagaatgtcgaccatctgatttttcgcagccgtaagtatgatgacaagtttgcagaggct
ttgtgcggtatcttgcgtgaacttcaggccttgaggcaattagatcttatcagtggaggc
cttactgatgttggagctgctaaacttgccagggctttgcaggactgtccacatatcaca
cacattaatgtcagcgataattctttgagagatgacgggataagagatattgcagaagta
ctatccagattacccaacacctcttccattgtgatggggaaaaacaacatctccacagat
ggagttctcatgcttactgagatgatgactgtctgcccctctgtacaggaattctatgtt
gagggaaataaggagatcaacatttccttttcaaaaagcagtgacacaacatgtgaaaac
atggacctgaatcaaacaaaagaggcaaagaacataacgttaaaacagtgtaacatcaca
tgtgctcatgtagccagcctgtctactaaactcaaaggcttcataactgttttagatttg
tccaacaactcgctaggaaacaagggcataaagaaaattctagaccttatgcctaaactt
ggaatgattcaggagatcaatgtcagtaaaaatggggtagatatggacgggttggtgttg
cttgtttctgctctttgtacgcagaggaacctaaggagagtggatgcaagtgcaaatgga
aaggacaaattggttctttggtttgacaccagcaagagactttcgaaacagccagcccca
aatgaaactgggttacatctgcataaaaaactcagtttaacccacagtgaaatacaaccc
ccctacatgaccaaactgtttaagcagctggtcaagtgtgaaaacctactggatatcgag
ttctcccatctaaaactgtcaaatgagacggtagagaagttgatgttaattcttcctgaa
atgtcttctcttcaactactgaacttaagtcatgttgacatgtctacgaatggggctttg
tcattggtcagatctcttgttgactgtcagcgcgtcacagcagtggaactcaggcaccag
gctgaagcatttattaagtttgttcctgtaaaggcagaggcagccatttgcaggctcatg
gagtataaactgaacagaaccaatgttgagaagctctcaaggatacttgaggactgtcct
catctagcagaactggatttgtcccataaccttctccgggatgagggcgtgaaatgtttt
gtcgattgtttgcctaaactgaagatctccagctcagtgagccttaatggcaacagaatg
acacagttgggggcactgcacctggtcaactcaatgaacacctgtgagaaagtggttgct
gttgaagtcagtcttggagtggaagatcagtctctgattcagtttgtgcaagaacacgtc
aacggcaagactctcagactaaaagagtgcagtttcgaagtcaaccacttgcagcagctt
gtggaaatactgaagagatgtcccagactactgacattagaattgtcatccagtttactg
cacgatcaaggcctgttttctttacttgactgtctggccaaactatccacaatacaaact
gtcaagttaagaaataatggtttgagtttggagcagattgagtattttttgaaacagctc
agctgctatcgccaacacagagacatcaggattgaagagctgtgtttgacaggaagtgct
gtggtcagtcttgtcagtaactgcttgaatttggaatcccaaattgaagaaatcagggtc
aaccgcgcatgcataaatgtcattatagatgccaattccagtcttcattctacttctgta
acgcattctgaaaacagagatttcccgctgtgtactctgagatccatcagttttaatgac
tgtgatacagaaggacatcatcttactccattaatacctcccatgcagaaatgtcattcc
ttgcagaatttaaaattctctcagctcaaaatggacagaaaaggtgtcgagtttttttct
gtagtcattccatccttagtgagtctaaagaacctcagtcttgatttgaaaggaacagct
gaggatgaggtggcagtacttgtggaagcattaccaaaaactcaaacaattgagactgtg
agtttgtctcagctggttttgaatgacagcggggctgcagtatttggcagggctcttcaa
aatctgccacatcttaagtcactcagtctcctccagtgctctggttggacagcagctcga
gggtgtgacttggtcagaggtctggtgcaatgtctctctctggcagaaatcaggataaac
tctttggttctgaatgaagagggcatctccatcttggccaaaggcttgtgcagtatggct
tcccttaggaagctcagcttaaacaacataagagtggaaacatccgagacatttgtgaat
ggcactggcatactctgtctcctggcctcctttcaggaatttagacagatggaagagatt
gagttggagagctggcgaatgggagacagtggaactcatgaacttgtgaagcatatttct
tcgtggaccgaactaagaaatataaatctgtcaaacaacaatattagcgacgaggttgga
gaaatgctggtagaggcactatcacgctgcacggttcttcagaaactacagctctccaaa
aaccgtctgggtcaagcttgtgctgctaagctatcacaagtctttcctttactgactcag
atctcagacctcgatttgtcagagaatcagtttggtcaaaaagggactttggcactttgt
gaaggtctggacaacatgaaggcactgaaaagactaaacttgacttcgattggaagttca
gacctggttggtgtggcatcatccctcaaacattgtccagccattgaggatgtcagcttg
tcttggaatgaatgtggtgatactctggcatggaaactggctgaggttcttcctctgtgt
acaatgttgaaaagacttgacctggaggccaataaaataagcacaaaaggagccgtggag
atttccaaatgcctcccatcatgtaaatccattgaagtgataaggctctggaggaaccca
gttgccaaagacgatgagaatctgaaagatcagagactgaacttctcatcagtttaa
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