Triplophysa rosa: 130562666
Help
Entry
130562666 CDS
T09216
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05045
solute carrier family 6 (neurotransmitter transporter, betaine/GABA) member 12
Organism
tros
Triplophysa rosa
Pathway
tros04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
130562666
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tros02000
]
130562666
Transporters [BR:
tros02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
130562666
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
DUF2207_C
Motif
Other DBs
NCBI-GeneID:
130562666
NCBI-ProteinID:
XP_057203805
LinkDB
All DBs
Position
LG12:5195692..5203392
Genome browser
AA seq
581 aa
AA seq
DB search
MGKEEGRIEERGYWGSKTEFLLAVAGIVIGLGNVWRFPYLCYKNGGGAFLIPYLVFVVTC
GVPLFLLETAMGQYTREGAITCWHRLCPLAEGIGYAGQLLVLYSCMYYIIILAWALFYLF
FSFSSQLPWASCDNAWNTDNCVNLAAKNLINRTARMNSTSSTTEFWERRVLLLSGGIEQM
GNINWEILLCLIAMWIVCYFCAWKGVKSTGKVVYFTATFPYVMLLVLLIRGLTLPGALQG
IMFYLYPEPSRLADPQVWMEAGSQIFFSYGLCTACLTVLGSYNKYTNNCYRDCLWLCLLN
SGTSLVAGFAVFSVLGFMAHEQGAPIEEVAESGPGLAFIAYPQAVAMMPLPQLWAVCFFI
MIILLGLDTQFVAMEVFMTSVTDQFPMVLRKAGRREMFLLFFCLGCFVSQLIMVTEGGVY
VFQLFDYFGYSGASLLFIAVFESLAMGWVFGAERMFDIIEDMTKTRPNYIFKLCWKYLTP
LVSLVSLVCSLVQYKPLTFNRWYVYPDWAYALGWLLALSSILLVPGWALVRLLAGKGSLR
KRWHLLCNPDTNLPLTCKQRTKIEETSCTAEMKVLVSTEEN
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaagaagaaggacggatcgaggagagagggtactggggaagtaaaacagagttt
cttctggctgttgcaggaattgtaattggtctgggtaacgtgtggaggtttccatacctc
tgctacaagaatggaggaggtgcattcctgattccatacctggtgtttgtggttacctgt
ggggttcctctgttcctgctagagacggcaatgggacagtacacacgagaaggtgccatt
acatgttggcatcgcctctgtccactggctgaaggtattggctatgcaggacagctgtta
gtgttgtatagttgcatgtattacatcatcattctggcttgggcgcttttctacctcttc
ttctccttcagctctcaacttccgtgggccagctgtgacaacgcctggaacacagataac
tgtgtaaatcttgctgcaaagaatctaatcaaccgcacagcaagaatgaattcaacctct
tcaactactgagttctgggagcgtagagttctgcttctctctggaggtattgagcagatg
ggtaacatcaactgggaaattctactgtgtctcattgcaatgtggattgtatgttatttt
tgcgcctggaaaggtgtcaaatctacaggcaaggtggtgtatttcacagccacatttccc
tatgtgatgttactggtgttgctgattcgtgggttgactcttcctggggccctacagggg
atcatgttttacctgtaccctgaaccatcccgtctcgctgacccacaggtttggatggag
gcaggatctcagatctttttttcttatggtttgtgtacagcttgtcttactgtactaggc
agctacaataaatacaccaacaactgttacagggactgcttatggctttgtcttctgaat
agtggtaccagtttagtggctggttttgctgtgttctcggtcctgggcttcatggcccat
gaacagggcgcccccattgaggaggtggcagaatcaggtcctggtctagcattcatagct
tatccacaggcagttgctatgatgcctcttcctcagttgtgggctgtgtgtttcttcata
atgattattttgctgggtctagacacacagtttgttgcaatggaggtttttatgacatca
gtgactgaccagttccccatggtgttgcgcaaagctggacgtcgagaaatgtttctcctt
ttcttctgtcttggttgctttgtaagccaacttatcatggtcacagaggggggggtgtat
gtattccagttgtttgactactttggttacagtggagcaagtcttcttttcatcgctgtg
tttgagtctctggccatgggttgggtctttggtgctgagagaatgtttgacatcattgaa
gacatgacaaagacacgacccaactacatattcaaactgtgctggaaatacctgactcct
cttgtgtctctggtgtctcttgtctgctctctggtgcagtacaagcccctgacatttaac
cgctggtatgtgtacccagactgggcgtatgcgttaggctggttactggccctgtcctcc
attctgctggtgcctggatgggcactggttcgcctgttggctggaaaagggagcctgcga
aagcgttggcatctcctgtgtaatccagatacaaacctccctctcacctgtaagcaacgg
accaaaatagaggaaacatcttgtactgcagagatgaaagtcttagtcagcactgaggaa
aactaa
DBGET
integrated database retrieval system
