Triplophysa rosa: 130562991
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Entry
130562991 CDS
T09216
Symbol
rin1b
Name
(RefSeq) ras and Rab interactor 3 isoform X1
KO
K17638
Ras and Rab interactor 1
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130562991 (rin1b)
Membrane trafficking [BR:
tros04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
130562991 (rin1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
RA
Motif
Other DBs
NCBI-GeneID:
130562991
NCBI-ProteinID:
XP_057204352
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Position
LG1:5637909..5751777
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AA seq
736 aa
AA seq
DB search
MDVSLQRSLSVLDRLLLTHSIWLQLSINPASTHQILQREIVGTFLVCKCSASHRKVLCVR
VGESGVCVSQYPIREEDSTFSLECSALSFPDLCRLVAFYTVSRDVLPFPLELPEAIVQAT
THTQLEIISHLGLEFWSSQTSPGLPNGPPPPSTPHRTPRVISPCFINPLFLQPPQPSRAA
SHKRHRFKRSLRVRVSNENSLSLSGGESDLTQGETPKDNSSQDGQRRTGGMSMLRRTQAL
SPTSEEEDEQMMGQIPPSNFIPQRDNDEPEDGEVCLALERTRAPSLAELDSNSSFSSLEE
EDNLVDSAEQWPPAARGTRFPSANPTSTLRRMTAAFVCVFAPERRVARLVDELSRDRRST
FGSLVQDFLEKQRQEIEASTSSSAVKILEGLRRFLSQAKSLLLEAGEIEPPIETLVPENE
KDLALEKALFGCVLKPLKVQLHQTLVSLHTLDGSLQRITDSMLACQEGALERLGVRVGVL
DIRGIDRAKTKLTLMQRSHSPIDKVLLLLQVCKSVYKAMGTQPDQPVGSEDFLPALAYVL
VQSNIPQLLLETEYMMELLDASWLTGEGGYYLTSVYASLYLIQSKPGTTPTCSLTSETQE
SLREWSRRRGQEAKTQKDNQQKQRFVRVLFQDDSRSAMRTLLWKAGENVDALAQICAGLF
GVKEPQHYCLFWRNEGEMRTLPANFQPHELGMHEGVSLSYLRSDHDFSKMRRLTRGGAVD
LGESVCEEQEVQQQCK
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgtctctccaaaggagtttgagtgttttggatcgtcttctccttacacactcc
atatggttgcagctgtccatcaaccctgcctctactcaccaaatcctacagagagagata
gtcgggacatttctggtgtgtaaatgtagcgcctcccacaggaaggttctttgtgtgcga
gtaggggagtccggtgtgtgtgtatcacagtatcccatccgagaagaagactccacattt
tctttagaatgttcagccctaagcttcccggatctctgcagacttgttgccttttacaca
gtcagcagagatgtgttgccttttcctcttgagctcccagaagcaattgtacaggcaaca
acacatacacagctggaaatcatttcacatttgggtttggagttctggagttctcagaca
tctcctggccttccaaatggtccccctccaccttcaacaccccaccgaacgcctagagtc
atcagcccctgtttcattaaccccctgttccttcaaccaccccagcccagcagagccgcc
tcacataaacgccaccgcttcaagcgcagcctcagggtccgtgtgtccaatgaaaactct
ctcagtctgtcaggtggagaatcggatttaacgcagggggagacacctaaagacaattcc
agccaggatggccagaggaggacaggagggatgagcatgcttaggaggacccaagctctg
tctcccacctcagaagaggaggacgaacagatgatgggacaaataccgcctagtaacttt
ataccccaacgggacaatgatgaacctgaagatggtgaggtttgccttgctttggaaaga
actcgtgctccttctcttgctgaactggacagcaatagctcttttagcagtctggaagaa
gaggacaacctggtggactccgccgaacaatggcctcctgccgcacgaggtactcgattc
ccctctgcgaaccccacctccaccttgcgccgcatgactgccgccttcgtctgcgtgttt
gctcctgaacgacgagttgcccgattggtagatgaactctcccgcgacagacgctctaca
tttgggtcattggtgcaagattttctagagaaacagaggcaggagatagaggcctcaacc
tctagttctgctgtcaagattcttgaagggttgaggagatttctgtcccaagccaagagc
ctccttctggaagcaggagaaattgagcctccgattgagacgttggtgcctgagaatgag
aaagatctggctctggagaaagctctgtttggctgtgtgttaaagccgttgaaggttcag
ctgcaccagacgctcgtctctctgcacactctggacggctccttacagaggatcacagac
agcatgttggcctgccaggagggggcgctagagcgtttgggtgtacgagtgggggtcctg
gatattcgaggcatagaccgagcaaagacaaagctcacactaatgcaacgaagccattcg
cctattgataaggtgttgcttttgctgcaggtgtgcaagagtgtgtacaaagccatgggg
acccaacctgatcagccagtggggtcagaggacttccttccggcattggcctatgtccta
gtgcaatctaacatcccacaactactgctggagacggagtacatgatggagttgcttgat
gcatcatggctgacaggagaaggtggatattatttgacaagtgtgtatgccagcctgtac
ctgatccagagcaagcctgggaccacgcccacctgtagtctaaccagtgagactcaagaa
agcttgcgtgagtggagcaggaggcggggccaagaggccaaaacccagaaagacaatcag
cagaaacagaggttcgtacgtgtgttatttcaggacgacagtcgtagtgcaatgcgaaca
cttctctggaaggcgggggaaaatgtagacgctttagcccaaatttgcgcagggctcttt
ggtgtgaaggagccccagcactactgtctgttctggaggaatgaaggggaaatgcgcact
ctacctgccaattttcagcctcatgaactgggcatgcatgagggggtttctctgtcctat
ctccgctccgatcacgacttcagcaagatgcgcagactgaccagagggggtgctgtggat
ctgggggagtcggtgtgtgaggagcaggaagtacaacagcagtgtaaatga
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