Triplophysa rosa: 130563192
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Entry
130563192 CDS
T09216
Symbol
six5
Name
(RefSeq) LOW QUALITY PROTEIN: homeobox protein SIX5
KO
K19474
homeobox protein SIX5
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tros03000
]
130563192 (six5)
Transcription factors [BR:
tros03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
130563192 (six5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
130563192
NCBI-ProteinID:
XP_057204603
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Position
LG12:complement(13652679..13660561)
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AA seq
952 aa
AA seq
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MASLSLESTEQTENGAKESTEDEAKVKEETDPDEVSEQLLQSFQNSALSFSTDQVACLCE
ALLQAGNVDRLWRFLSTIPPSAEMLRGNETLLKARALVAFHRDEFKELYAILDSHDFHPS
NHGFLQDLYLKARYKEAERSRGRSLGAVDKYRLRKKFPLPKTIWDGEETVYCFKERSRNA
LKECYKINRYPTPDEKKNLAKATGLSLTQVSNWFKNRRQRDRTPSGTNSKSESDGNHSTE
DEASKGDLEDITDKPAQETGNSTAPLLSFTGAPGSTGGQLILNSTGGFLTSSHPLLLNGS
PILSGAGTGVIINGLTLSDGHTVTLSPVTANAPLLLNGAQMITKDERRFNDMDVQSSPPN
MVLSPHASLTNTIPLSISEEAKTASSSVSPLDFISLPEALKNLDNTHSVPTNSMSTSTIS
TSVISSMSFPSVVLTQNSVSTSTAGSANSVISSPLVPLHPTQPPEIVVFAKTEALAPSCS
SSPQVLSLPQVVPSIQGIPVSQLMQHPPGATLSSCPQLVPVSPLNPQLPQCHIPQFPTQT
LHIGPRLAQAQPPNSSNTLSTSTALSLSQLADSQLAQGLAGQLGDXTTSATISQNSMGTP
VIPISSPTQVVPISQPKDTGQPQLVPLSLPQFMPVSSIAGTPTGTFSFPQVVPAAPSLSI
PSPGGVFQILTSGSGAGLSVAQGPIRLSPIGPPQSVPTASIPGVQLLNSGVIQLPSASPG
NFLLAGGLGGSPILSLQNGKLILTIPTGIQFTTMPVKSVLENTVSSAIDLTSIVPPLENP
PVPSFTAQTSNSLQSSPLGFIGSSTLYCSPEPGTIANPTPGASPNTPDSSSTPTPTGVLQ
SHQTLSPDSMLPLSPICSGVATGTHLSQPVWSPVPLSSSAGLTLFDMRGKGDLPEDPALL
VLPGGESLLLGTPPPGEDVERHSQLDDLEDMDGDSKILTQLQSVPVDDELVL
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atggcttccttgtctttggagtccacagaacaaacggaaaacggtgcaaaggagtccacg
gaagatgaagccaaagttaaagaggagacggatccggacgaagtttcggaacaactgctg
caaagcttccagaactcggcgctcagtttttccaccgatcaagtcgcgtgtctgtgcgag
gcgctcctgcaagcgggcaatgtggatcgcctgtggagatttctctccaccatccctcca
tcggccgaaatgctacgtggcaatgagaccctgctgaaggcccgggctttggtggctttt
cacagggacgagttcaaagagttgtatgccatactggacagtcacgactttcacccgagt
aaccatgggttccttcaagacctctacttaaaagcgcgctacaaggaggctgagaggtcc
cggggtcgcagtctaggcgccgtggacaaatatcgactccgaaaaaagttccctctgcca
aaaaccatttgggacggagaggagacggtgtactgcttcaaggagaggtcgcggaacgct
ctgaaggagtgctacaagatcaacaggtatcccactccggacgagaagaagaatttagcc
aaagccaccggactttctttgactcaagtgagcaactggtttaagaatcgccgacagaga
gaccgaaccccgtctggtaccaacagcaaaagtgaatctgatgggaaccacagcacagaa
gatgaagcaagcaaaggagatctggaggacataactgacaaacctgctcaagagacaggc
aactccactgcacctcttttatctttcaccggagctcctggcagtactggtggtcagctt
attctcaatagcacagggggattcctcacaagttctcacccactgctgctcaatgggagc
cctatactctcaggggcaggaaccggggtcatcatcaatgggttgacactaagcgatggt
cacacagtcactctaagtcctgttacagcaaacgcaccattgctacttaatggggcacaa
atgatcaccaaagacgaacgtaggttcaatgacatggatgtccaaagcagcccacccaat
atggtgctgagtccacatgccagtttaacaaacacaatacctctctctatcagtgaagag
gcaaaaacagccagcagcagtgtttctccactggatttcatctctcttccggaggcctta
aagaatctagacaatacccactcagtgcctacaaactctatgtccacgtccaccatctcc
acttcggttatctcttcaatgtcttttccttcagtggtcttgacccaaaatagtgtttct
acgtcaacagctggctccgcaaactcagtcatctctagtcccttggtgccactacatccc
acacaaccaccagagattgttgtatttgcaaagactgaggccctggccccctcctgcagc
tccagccctcaggtgctgtctttaccccaggttgtaccatctatacaaggcattccagtg
tcccaactaatgcaacacccacctggggccaccctgtcttcatgtccccaacttgtaccg
gtctcccctctcaatccacagctaccccaatgtcacattcctcagtttccaacacagacc
ttgcacattggtcccagacttgctcaagctcagcccccaaacagctccaacacactaagc
accagtacagctttatccctctcccaactggccgatagccaacttgcacaaggacttgcg
ggtcagctaggagactagactacttcagccacgatctcacagaactctatgggaacaccg
gtgattcccatctcctctccaactcaagttgtgcccatttcccagcccaaagacacaggc
cagcctcagctggtccccctgtcactgcctcagtttatgcctgtgtcatccatcgcagga
actcccactggaacattctctttccctcaggtggtcccagcggcaccgtctctttcaatc
ccatccccaggaggcgtgttccagattctgacatctgggtctggagcaggattaagtgtt
gcccaggggccgatacgccttagcccaataggtcctcctcagagtgtccctactgcttcc
atccctggtgttcagctgctgaattctggggttatccaactgccttcagcgtctccaggc
aacttcctattagcaggtggattaggaggcagccccattctaagtcttcagaatggtaaa
ctcatccttactatcccaactggcatccagttcactaccatgcctgtcaagtctgtccta
gaaaacacagtttcaagcgccattgatctaacctctatcgtacctccacttgaaaatcca
ccagtgccttcattcactgctcaaacttcaaattcactacagtcgtctcctttgggattt
attggttcctctacactttactgcagccctgagccagggaccattgccaaccccacccca
ggagcttctcctaacactccagactcctctagtactcccacccctacaggcgtcctacaa
tcccaccagaccctcagccctgatagtatgctccccctcagtccaatctgtagtggcgtg
gcaactggcactcacctctcacagccagtctggagcccggtgcctctgtcctcctctgct
ggcctgacattatttgacatgcgtgggaaaggggatctaccggaggaccccgctttgttg
gtcctaccgggtggagagtctctcctgttgggcactcctcctccgggcgaggatgtggaa
agacattctcaactggatgatttagaggacatggatggggactccaaaattcttacacaa
ctccagtctgtccctgtggatgatgagttggttttgtaa
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