KEGG   Triplophysa rosa: 130563243
Entry
130563243         CDS       T09216                                 
Symbol
polr2i
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
tros  Triplophysa rosa
Pathway
tros03020  RNA polymerase
tros03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tros00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    130563243 (polr2i)
  09124 Replication and repair
   03420 Nucleotide excision repair
    130563243 (polr2i)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tros03021]
    130563243 (polr2i)
   03400 DNA repair and recombination proteins [BR:tros03400]
    130563243 (polr2i)
Transcription machinery [BR:tros03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     130563243 (polr2i)
DNA repair and recombination proteins [BR:tros03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      130563243 (polr2i)
SSDB
Motif
Pfam: Zn_ribbon_RPB9 Zn_ribbon_TFIIS Ogr_Delta Zn_ribbon_recom Zn_Ribbon_TF Zn_ribbon_GRF_2 Zn_ribbon_NrdR GpA_ATPase HVO_0758 Lar_restr_allev SR1P Zn_ribbon_Top1 DZR
Other DBs
NCBI-GeneID: 130563243
NCBI-ProteinID: XP_057204658
LinkDB
Position
LG12:complement(5331754..5339480)
AA seq 126 aa
MELEGGTYGPGFVGIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKIT
HEVDELTQIIADVAQDPTLPRTEDHPCPKCGHKEAVFFQSHSMKAEDAMRLYYVCTAPHC
GHRWTE
NT seq 381 nt   +upstreamnt  +downstreamnt
atggagttagaaggtggcacgtatgggcctgggtttgtgggcattagattctgtcaagag
tgtaataacatgttgtatcctaaagaggataaagaaaatcgcattctgctctacgcttgc
aggaattgtgactatcaacaggaagctgacaacagttgcatttatgtgaacaaaatcacc
catgaggttgatgaactcacacagattattgcagatgttgcccaggatccaacattgccc
aggacagaggaccatccgtgccccaagtgtggccataaggaggcagtgttcttccagtct
cacagtatgaaagctgaggatgccatgaggctttactatgtctgcactgctccacactgt
ggccacagatggacagagtga

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