Triplophysa rosa: 130563272
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Entry
130563272 CDS
T09216
Symbol
chd2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tros03036
]
130563272 (chd2)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
130563272 (chd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
130563272
NCBI-ProteinID:
XP_057204697
LinkDB
All DBs
Position
LG12:15047319..15083937
Genome browser
AA seq
1806 aa
AA seq
DB search
MMKNKNKKQEDEGSTQSNASSNSASEESNRSGSESGSQSESEQGSDRPRSRRSESNSTSD
SESHSESESESTGSKSRQTSAQGKDKPVRKKDNLADVKKMWEEHPDIYGVRRSSRSRQEP
ARLNIGAEGSSGSESESPKRKGSRQKKKDKTWKDDDSNGEDDDDDEEEASSSESEQEEKK
VRSRRLPARRPQTKSSAGKQSQKARKQRKQESSEEEDDDDDDDDDDDDDEEDTPKRQTRR
RAATKVSYKEDQNDFETDSDDLIEMAEGAEEQQDDDSETIEKVLETRIGKKGATGASTTF
YAVEENGDPGADFDPEKEEGETQFLIKWKGWSYIHNTWESVDSLTQQKVKGIKKLDNFKK
KNEELNAWMKRASPEDLEYYNCQQELTNDLSKQFQIVERVIATRTGKSQASSDFSPQKST
SSEPEYLCKWMGLPYAECTWEDGALITKKFQSCVDSFQTRNACKTIPSKDCKVLKQRPRF
LPLKKQPSYIGDENLELRDYQLDGVNWLGHSWCRCNSVILADEMGLGKTIQTISFLSYLF
HQHQLYGPFLVVVPLSTLTSWQREFNIWAPDMNVVVYLGDVSSRKTIRDYEWIHQQTKRI
KFNALLTTYEILLKDKGVLGNINWAFLGVDEAHRLKNDDSLLYKTLIDFRSNHRLLITGT
PLQNSLKELWSLLHFLMPEKFESWEDFEDEHGKGRENGYQSLHKVLEPFLLRRVKKDVEK
SLPAKVEQILRVDMSAQQKQFYKWILTRNYKALSKGTRGSSSGFLNIVMELKKCCNHGFL
IKHPEDSETETAQERLQAVVRGSGKLVLLDKLLTRLRERGNRVLIFSQMVRMLDILADYL
SFKRYQFQRLDGSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDS
DWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLDHLVIQRMDTTG
RTVLDNNSGNSNSNPFNKEELTAILKFGAEDLFKEAEGEESEPQEMDIDEILRLAETRES
DQGLGSATDELLSQFKVANFTMDESTPELEEKPVRDWDDIIPEDQRKKVEEEQKQKEMED
IYMLPRSRSSNKRAQANDSDSDVGSKLKQRTSGSDSESDDSGDDKRPKRRGRPRARKNNV
EGFTDAEIRRFIKAYKKFGAPLEKLEAIARDSELVDKSIADLKRLGELLHNSCVTAVQEH
EEHMKENPVEAKGPGKRRGINIKISGVQVNAKSIIQHEEDLEPLHKSVPSNPAERSKFQL
TCRVKTPHFDVDWDINDDTQLLLGIFEHGYSNWDLIKTDPDLKLSEKILPDDPNKKPQAK
QLQMRADYLLKMLKKEQENQDTAKAGDETKAKKRKPRTKKKAPNNELANEISSPRLSDNP
SEEGEVKDDGAEKSPTKKKQKKDNKENKEKTGTPKKEKEGEKDKKRCKSKKEKAKPGGKG
KKAQGPVHITAGSEPIPIGEEDDELDQETFSICKERMRPVKKALKQLDKPDEGLSVQEQL
QHTRTCLLKIGDRITECLKSYSDPEHVKTWRRNLWIFVSKFTEFGARKLHKLYKMAQKKR
SQEEEKDQKKKDGPAKKKPFRPEPSGSSRDSTGTHPSANHPPGPPPPHVHHREPYNQSNK
RPFPNDDRGDWQRDRKYGYPGNSSQPWQGDRHHPYDTHRYRDHYGDRRPHNDYRSSGSYR
NSGSPRKRPYDQYGNDRDHRGHRDYYDRHPDPKRRRSDEYRSPNYHQGGGGHPQDFRRLP
DHRGPIGNHGPVGPDHYRPFHPDKPPPLIDPRSPQAQKSPLEPISPAERTGEQKSVTDFN
WNSRKT
NT seq
5421 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaataagaataaaaagcaggaagacgaaggctcgacccaaagcaatgcttcc
agcaactcagcgtcagaggaatcaaaccgctctgggtcagaatctgggagtcagtcggag
agtgagcaaggaagtgataggcctcgttcccggcgttccgagtccaacagcacctcagat
tcagagagccactcagagtcggagagtgaatccactgggtccaagtctcgccagacttca
gcacagggcaaagacaaaccagtcagaaagaaagacaacctggcagatgtgaagaagatg
tgggaagaacatccagatatttatggtgttagaagatccagtcgcagcagacaagagcct
gcccgcctcaacattggagctgagggcagcagtggttcagagagtgaaagtcccaaaaga
aaaggctcacgtcagaaaaagaaagataaaacctggaaagatgatgactcaaatggtgaa
gatgatgatgatgatgaggaagaggccagcagttcagagagtgagcaggaagagaaaaaa
gttagatccagacgacttcctgctagaagaccacagaccaagtcatctgcaggcaagcag
tcccaaaaagcacgaaaacagaggaaacaagagtcttccgaagaagaagatgatgacgat
gatgatgatgatgatgacgatgatgatgaggaggataccccaaaaagacaaacaaggcgc
agagcagcaactaaagtcagttacaaggaggatcagaatgattttgagacggactcagat
gatctcattgaaatggcagaaggtgctgaggagcaacaggatgacgacagtgagaccatt
gagaaggttcttgagaccaggataggaaagaaaggagctactggagcttccacaaccttt
tatgctgttgaggaaaatggagaccctggagcagactttgaccccgagaaagaggaaggg
gaaactcagttcctcatcaagtggaaaggctggtcctacatccacaacacttgggaaagt
gtggactctctcacgcagcagaaggtcaaagggataaagaagctagacaacttcaagaag
aaaaacgaagagcttaatgcttggatgaaaagagcttcacctgaggatttagagtattac
aactgccagcaagaactaactaatgacctgagcaagcaattccaaattgtagagagagtg
attgccacgagaacaggaaaatcacaagcatcctcagatttttcaccccaaaaaagcact
tccagtgagcccgagtacttgtgtaagtggatgggactgccctatgccgagtgcacctgg
gaggatggagcattaattacaaagaaattccagtcgtgcgttgatagtttccaaaccagg
aatgcctgtaagacgatcccttccaaagactgtaaggtgttgaaacagaggccaaggttt
ttacccttgaagaaacagccttcttacattggagatgagaaccttgaactcagagattac
cagttagatggagttaactggctcggccactcctggtgcaggtgtaacagtgttatcttg
gctgatgaaatgggtcttggtaagaccattcagaccatctccttcctgtcttaccttttc
catcaacatcagctttatgggcccttcctggtggtggttcccctgtcaactctcacctcc
tggcagagggagtttaatatctgggcacctgatatgaatgtagtggtctacctgggagat
gtctcaagcagaaagacaatccgtgactacgaatggatccatcagcagacaaaaagaatc
aagttcaatgcacttttgaccacgtatgaaattctactgaaggataagggagtgttgggc
aatataaactgggcctttctgggagttgatgaagctcaccggcttaagaatgatgattca
cttctgtacaaaactctgattgacttcagatccaatcacaggctgctcatcacagggact
ccgctgcagaactccctcaaggagctgtggtcccttttgcactttctgatgcctgaaaag
tttgagtcctgggaggattttgaggatgagcatggtaaaggcagggagaacggatatcag
agcctgcacaaagttctggagcctttcctgctgcggcgtgtcaagaaagacgtcgagaaa
tccctgcctgctaaagtggagcaaatcctccgagtcgacatgtccgcccagcagaaacag
ttctacaagtggatcctaacaagaaactacaaagctttgtctaagggcacccggggcagc
tcctctggctttcttaacatcgtgatggagctgaagaaatgctgtaaccatggtttcctc
atcaaacacccggaggacagtgagactgaaacggcacaagagcggctgcaggctgtggtg
cgtggcagtgggaagctggttcttctggataagctgctcacacgactgagggagagagga
aaccgtgttctcatcttctcgcagatggtccgcatgttggacatacttgcagattacctg
tctttcaaacgatatcaattccagcgtttggacggctctatcaagggagagatcagaaag
caagcattggaccactttaatgctgaaggctctgaggacttctgttttctgctgtccaca
cgtgcaggagggcttggaattaacctggcctctgccgacacggtggtcatctttgactca
gactggaatccacagaatgatcttcaggcccaggccagagcccacaggattggccagaaa
aaacaagtgaatatctatcgtctggtcaccaaaggcacggtggaggaggacattatagaa
agggcaaaaaagaagatggttcttgaccatctcgtcattcagagaatggacaccactggg
cgaaccgtcctggataacaactctggaaattcaaactcaaaccccttcaataaagaagag
ttgacagcaatcttaaagtttggagcagaggatttgttcaaagaagctgagggagaggaa
tcagaaccacaggaaatggacatcgatgagatcttgcggcttgctgaaacaagagagagt
gatcagggattagggagtgccacagatgagcttctgtcacagttcaaggtagcaaacttc
accatggatgaaagcactccagagcttgaggagaagcctgtgcgagactgggatgacatc
attcctgaagaccagcgaaagaaggtggaggaggaacagaaacagaaagagatggaagac
atctacatgctgcccagaagtaggagctccaacaaaagggcacaagctaatgacagtgac
agtgatgtgggatcaaaactgaagcagagaacctcaggctctgacagcgaatcagatgac
agcggggatgacaaacggcccaagcgaagaggcaggccgagagctcgcaaaaacaacgtc
gagggatttacagacgctgagatccgcaggttcataaaggcatataagaaatttggagca
ccgcttgagaagttggaggcgattgcccgtgactctgagctggtagataaatctatagca
gacctgaagcgattgggagaactgctgcacaacagctgtgtgactgcagtacaagagcac
gaggaacacatgaaggaaaaccctgtggaagctaaaggacctgggaaaagaagaggcatc
aacatcaagatctcaggggttcaggtcaatgcaaagtccattatccagcatgaagaagat
ttagagccactccataaatctgtgccttcaaatcctgcggaaaggagcaaatttcagctg
acctgtcgagtgaaaacaccccattttgatgtagactgggatattaatgatgacactcag
ctgttattgggcatcttcgagcacggctacagcaactgggacctgattaagaccgaccct
gatctcaaactctcagagaagattctaccagatgaccctaacaagaaacctcaggcaaag
cagttacagatgcgagcggactacttgctcaagatgctgaagaaagaacaggaaaaccaa
gatacagcaaaagcaggagatgagaccaaagccaaaaagaggaaacctcgaacgaaaaaa
aaggccccaaacaacgagctggctaatgagatttcctctcctcgtctctctgacaaccca
tcagaggagggagaagtgaaggacgacggagcagaaaaatcacccacaaagaagaaacag
aaaaaggataacaaagagaacaaagaaaaaacaggaactcctaaaaaagaaaaggagggg
gagaaggacaaaaagcgctgcaagtccaaaaaagagaaggccaaaccaggaggcaaaggg
aagaaggctcagggtccagtgcacatcactgctggaagtgagccgataccaattggagag
gaagatgatgagttggatcaggagacattcagtatttgtaaggagaggatgaggccagtg
aagaaagctctgaagcagttggataaaccagatgagggtctgtcagtacaagaacagctg
cagcacactcgtacctgcctgctgaagatcggagaccgcatcactgagtgcctcaaatca
tacagcgaccccgagcacgtcaagacgtggcgcagaaacctctggattttcgtgtccaaa
tttactgagtttggggctcggaagctgcataagctgtataagatggctcaaaagaagcgc
tcgcaagaggaagagaaggatcaaaagaaaaaggacggtcctgccaagaagaagcccttt
cgacctgagccatcagggtcaagccgggattcaacaggcactcacccttcagccaatcac
ccgcctggacctcctccccctcatgtccatcacagagagccatacaaccaatctaataaa
aggcctttccctaatgatgacaggggagattggcaaagggaccgtaaatatggctaccca
ggtaacagcagtcaaccctggcaaggggatcggcatcacccgtacgacactcacaggtac
agggaccattatggcgatcgccggcctcacaatgattaccgtagctcagggagctaccgt
aacagtggttcacctcgcaagcgtccctatgaccaatatggtaatgacagagatcatcgg
ggccacagagactattatgacagacatccagaccccaagaggaggcgctcggatgaatac
cgttccccgaattaccatcaagggggaggagggcatccacaagacttcaggaggttgcct
gatcacaggggaccgattgggaatcacggccctgtggggcccgatcactaccgccctttt
cacccagacaaacccccacccctgattgatcctcgttcccctcaagcccaaaaatcccct
ctcgaaccaatttcacctgcagaaagaactggagagcagaaatctgtgacggacttcaac
tggaacagcaggaaaacgtga
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