Triplophysa rosa: 130563304
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Entry
130563304 CDS
T09216
Symbol
rsf1a
Name
(RefSeq) remodeling and spacing factor 1 isoform X1
KO
K11657
remodeling and spacing factor 1
Organism
tros
Triplophysa rosa
Pathway
tros03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130563304 (rsf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tros03036
]
130563304 (rsf1a)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
130563304 (rsf1a)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PHD
WHIM1
WSD
DDT
Motif
Other DBs
NCBI-GeneID:
130563304
NCBI-ProteinID:
XP_057204741
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Position
LG12:complement(24463572..24474273)
Genome browser
AA seq
1273 aa
AA seq
DB search
MAAPSTTAGLPPASSPGFAVLCSFLERYGSALDLPELNFSQLERYLQETSAVPQPLIELH
VKLLRKISKSVTTEKWEKYLIKVCQECNSTWAWELERKSYAEMTVEFKTGILKYLCECQF
DDNLKFKTLVNEEDPDNMRLQPIGRDKEGLMYWFQLDQEQNVRVYAEEQDDLDGSSWRCI
ARTRNDLADALDQLKAQIDSSVNQEKLDGPKSPSTEKEGKAGDLKNCGSTLTDSIITSTK
TNNSMKREASPVAVKPERDVKDEAEWKDVSKPKTQPIPVIDNRVSTIKTLVKEEAKDCPR
TWNTISVVMPPVPVKPEMQDDKKEPTRVISSDQQAKIPLKKRELKRSGGYDISNHYGNVN
HNNNNLNSNGSISTSTGGIIVRNPSVLLVKEPHVRNEEKMPTVTVPQELNITSSCEKQTS
VEPYQKTIRGQYVGVGVIKGPLDRKRPLAESENTSTKDRNGLHGNGSVLTSGAGDEDGGR
RSVLVGRSVIKTDNGSVPEEFLSKDVNKMCPDVLESPTIEETETIEMKESQTDVPAENES
EEKSLRSPRKRSSQKSKSKLHRRDEGQSTKHSSSDICRVSERGEAGEGETHEDDDDEEVS
SELQKEGIRLKIKIPRHRRTPELQHIQSETSNRRSLRRSARICKPSPKVADIQDRKPDQT
LTAQGEHTEDEEVKILPTKEVDKKVDVEGRTKSLKGKRRHRRPRWSKTRAKNCKSKGALE
GDEDAGDDKATNDEDNKSERGDNKSESDSDQSNELPPEDACKHCGLTNHPELILLCDLCD
SGYHTACLRPPLMIIPDGEWFCPPCQHKLLCERLEEQLQNLDTALKKKERAERRRERLVY
VGISVENIIPTPDGDAGDDSPQKKKDAKKSNNLGRRSTRTRKSISYRFDDFDEAIDEAIE
EDLQDSQDTAGVGCDKHVSTVTNQQRSTVSRETRRSVKPLAPRKRKRRRLKDLDSDSTVD
EEESEDDFQLSDSMEEEEFVVSGDGDAEVGSGEGSEWGSADSNAGNPSRSRRTSRSTHTQ
RARRSRGRLSSRRRGSSEEEVLNSEEEEEEEEMETEASNEFSESDVDTSRRRPRRRQNSF
VNYYETSESEGSQKASNQKNSSVVHRRRLSSSNSEESVHSQDFEPKSLQRRDRGQRSESR
RDESKQRHQHLKQRQQRSSSEEDEEENSEEEGETDGSEEDQRPLRRRSNRIETDDEEEEE
GVRQRRQNTRGKISTGKSSKVPEDSRSKHTPKGRHNGLVPLPAAARDEDDEEEEEFTGVT
DLVNFVFDSEQLS
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccgagcaccacagcgggtcttcctccagcttcaagtcccggttttgcggtg
ctttgctcttttctggagcgctacgggtctgctctggatctgcccgagctgaatttctcc
cagctcgagcggtacctacaggaaacctcagcggttcctcaacctctgattgagcttcat
gtcaaactgctgcgtaagatcagcaagtcagtcacgacggagaagtgggagaagtatctt
ataaaggtgtgccaggagtgtaacagcacctgggcttgggaactggagagaaaaagttac
gctgaaatgaccgttgagtttaagactgggatcctgaagtacttgtgtgaatgccagttt
gacgacaatctcaagtttaagacgttggttaatgaagaagacccggacaacatgcgtctg
cagcctatcggtagagacaaggaaggccttatgtactggtttcagttagaccaagagcag
aatgtgcgtgtttatgccgaagaacaagacgacttggatgggtcctcctggagatgcatt
gcaaggacaagaaatgatcttgcagacgcacttgatcagctgaaagcccagattgactca
tctgtcaaccaagagaagctggatggtcccaaaagcccaagcacagaaaaagaaggtaaa
gctggcgacttgaaaaactgtgggtccactttaaccgacagcatcatcacttctacaaaa
actaacaacagcatgaaaagagaagcatcacccgttgctgttaaaccagagcgagacgtc
aaagatgaagctgaatggaaagatgtgtccaaacccaaaacacagccgatcccagttata
gacaacagagtcagcacgattaaaaccctcgtcaaagaagaagccaaggattgtcccaga
acctggaacaccatatcggtcgtcatgcctcctgtccccgtcaaaccagagatgcaggac
gacaagaaagagcccaccagagtcatcagcagcgatcaacaggctaaaataccactgaag
aagagagagctgaaaagaagtggaggctatgacatcagcaatcactacggcaacgtaaat
cacaacaacaataatctgaacagcaacggcagcatcagcaccagcaccggggggataatc
gtacgcaatccctcagtcttactggtgaaggagccgcacgtgaggaatgaagagaagatg
ccaaccgttactgtcccacaagagctcaacatcacgtcgtcttgtgaaaagcagacgtcc
gttgagccgtaccaaaagacgatacgaggtcaatacgtaggtgttggagtcatcaagggt
ccccttgatcgaaagaggccgttggctgaaagtgaaaacacttccacaaaggatagaaat
ggtcttcatggaaatggcagtgtcttgacatctggcgctggagacgaggatggcggtaga
cggtccgttcttgtcgggagatctgtgattaaaacggacaatggtagcgtcccagaggaa
ttcctgtctaaagatgttaacaagatgtgcccagacgtgcttgagtctcctacgattgaa
gaaacagaaaccattgaaatgaaagagagccagaccgacgttccggccgagaatgaaagt
gaagagaagagtttgagaagcccgagaaagaggagctctcaaaagagcaaatccaagctg
cacagaagagatgagggtcaaagcacaaaacactcctcgtccgacatctgcagggtttca
gagagaggagaagcaggagaaggtgaaacacacgaagacgatgacgatgaggaggtatcg
tctgaacttcagaaggaagggattcgactgaagattaagatcccgcgtcacagacgtact
cctgaactccagcacatccagtctgaaaccagcaatcgacggtccttacggagatctgct
cgcatctgtaaacccagccccaaagtggctgatattcaggatcgaaaaccagatcaaaca
ctgacggctcaaggcgaacacacagaagacgaagaggtgaaaattctgcccacaaaggag
gttgacaagaaggtggacgtggaaggacggaccaagtctttaaagggcaagcgacgacac
agacgcccacgctggtcgaaaacccgtgctaaaaactgcaaatccaaaggagccctggag
ggcgacgaggatgcgggtgatgacaaagccacaaatgatgaggacaacaaatcggagaga
ggagacaataagagtgagagtgactcggaccagtcgaatgagcttccgcctgaagatgct
tgtaaacactgcggtctcaccaaccaccccgagctgattctcctgtgtgacttgtgtgac
agcggctatcacacagcctgtctgagacctcctctcatgatcattcctgatggagaatgg
ttctgtcctccctgccagcataaacttctctgtgagaggttagaggaacagctacagaat
ctggacacggcgctgaagaagaaagagagagctgaacgaaggcgtgaacggttagtgtat
gtgggcatcagcgtggagaacatcatcccaaccccagacggtgacgccggagacgactcg
ccacagaaaaagaaagacgcaaagaagagcaacaatctgggccgtcgatccaccaggacg
aggaaatccatcagttacaggtttgatgactttgacgaagccatcgatgaggcgatagag
gaagatcttcaagactcgcaggacacagcaggtgtcggatgtgataaacatgtgtcgacc
gtcacgaatcaacagcgcagcacggtcagccgagagactcgccggtctgtgaagcccctc
gcaccacgtaaaagaaaacgccggcgactcaaagacttggacagtgacagtacggtggac
gaggaggagagtgaggatgactttcagctcagtgacagcatggaggaggaggagtttgtg
gtttcgggagatggcgatgctgaagtgggctccggtgagggcagtgaatggggcagcgct
gatagtaatgctggaaatccatcgagatccagaagaaccagcagaagcacacacactcaa
agagccaggaggagcagaggcagactttccagccgacggagaggctcctcagaggaggag
gtgttaaactcagaagaggaggaggaggaggaagaaatggagacggaggcatcgaacgag
tttagcgagagcgacgtggacacgagcagaaggcgtccacggcgcaggcagaactctttc
gtcaactactacgaaacgtccgaatcggaggggtcacaaaaggcgtccaatcagaagaac
tcgtccgtggttcaccgtcgacgactgtccagctccaacagtgaagagtctgtacattct
caagactttgagccaaagtccctgcagagaagagacagaggacagagaagcgagtccaga
cgggacgaatccaaacagagacaccaacatctaaaacagagacagcagagaagctccagt
gaggaagatgaggaggagaactctgaggaagaaggagaaacagacggatctgaggaagac
cagcggcccctccgcaggaggtcaaaccgcatagaaactgacgatgaagaggaggaggaa
ggcgtgcggcaaaggaggcagaacaccagaggaaagatctccacaggcaagtcctctaaa
gtcccggaggactccaggtcgaagcacacacccaaaggcaggcacaatggcctggtccct
ctgccggcggcagctcgggatgaggatgatgaagaagaggaagagtttactggagtcacg
gaccttgttaactttgttttcgacagcgagcagctgtcctga
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