Triplophysa rosa: 130563307
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Entry
130563307 CDS
T09216
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
tros
Triplophysa rosa
Pathway
tros03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
130563307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tros03021
]
130563307
03036 Chromosome and associated proteins [BR:
tros03036
]
130563307
Transcription machinery [BR:
tros03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
130563307
Coactivators
SAGA/TFTC/STAGA complex
130563307
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
130563307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
130563307
NCBI-ProteinID:
XP_057204746
LinkDB
All DBs
Position
LG12:24659048..24734562
Genome browser
AA seq
932 aa
AA seq
DB search
MAGASDPLEDMLFSEVDEKAVSDLVGSLESQLVGQSDPAIAPPQSTQSGCGNTHPGSAKQ
QTGGKALLPARLDAPSEPPPPQQQQLPPQQHGREAAGNPDSDPKEPGGDKHAKAADKESS
LKSHGNIITITTTATASSDGASVPAPGNKGESPRDTRNKHPANSRALRTAASNSLNGNGG
SAASAPSSSGSCSPPPSTVTLPCPNSATSSAPSNPQAIALDRMTPTIALQRLPRHIIASI
AQNGNGTSVTALVQQGAAGGQANHGKPADAPGNNAKPAGHSGSAATPVTSATPAALSAPV
KPAAAVSAPPVTPLIRPAQTQARAAPPAQQRLVTPQLIVRPPQQQTTIQLPPGFTIPPGM
VLVRTEMGQLVMVPQQALAQAQNSISPRASTPASASTFRVTTPQSPVSTQAIRPAPAAQT
KMVSSSSPSTPAQTSTSTSPAKTPVAAVVAVTAPQQVQPALGPQGPLTQMPLAPQSAAAP
APGAPVVSQEMQENVKKCKNFLATLIKLASHNSPSPETSKNVKALVQDLLDAKIDPEEFT
SRLQSELKSSPQPYLVPFLKKSLPALRLSLLSSQSLSQPIQANKTSVSPVQTVVSVRPQQ
PNSTGLLSPGIKRAAGPGAQIRMPVVVTHTVRATGTLGKPSAIQTGRGPAGINIQLSGNH
KNRPNDPGGGSFRDDDDINDVASMAGVNLNEESARILATNSELVGTQIRSCKDEAFLPTG
LLHRRILETAKRFGVTEVALEAVNFISHATQSRLRTVLEKVSSIAQHRMDSCKEDEWYEH
ASDVRAQLKFFEQLERMEKQRKDEREREILLRAAKSRSRQEDPEQARLKQKAKEMQQQEL
AQMRQRDANLTALAAIGPRKKRKVDSPGAPTTGSEVSGSSAGSPAGSSAPSSSSRQYSRQ
RITRVNLRDFIFYMEQERETNRSLLLYRALLK
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcctccgaccctctggaagacatgctcttctccgaggtggacgagaaagct
gtgagcgatctggtgggctcgctggagtcccagctggtgggccagagcgacccggccatc
gcaccgccccaaagcacccagtcgggctgtggaaacacccacccgggcagcgcgaagcag
cagacgggaggaaaagcgctgctgcctgcccgtttagacgctccatcagaaccaccacca
ccacaacaacaacaactaccaccacagcagcacgggcgtgaagctgcaggcaacccggat
tctgacccgaaagagcccggcggggacaaacacgccaaagcagcggataaggagagcagc
ctgaaatcacatggcaacatcatcacgatcactacaacggcaacagcatcctccgacggg
gcatcggttcctgcgccgggcaacaaaggtgagagtccaagggacacccgtaacaaacac
ccggcgaacagtcgcgcgctgcgcacagcagcatcaaacagtctcaatggcaacggagga
agcgcagcatcagcaccatcgtccagcggatcttgctctccgccgcccagcacagtgacc
ctaccgtgcccgaacagcgcgacttcaagcgcgcccagtaaccctcaagcgatcgcgctg
gaccgcatgacgcccactatcgcgctgcaacgactcccgcgtcacatcatcgccagcatc
gcgcagaacgggaacggcacctccgtgaccgcgctggtccagcagggcgcagcgggcggt
caggcgaaccacggcaaacccgcagacgcgcctgggaataacgcgaaaccggcggggcac
tccggttccgcagccactccggtgacttcagcgactcccgccgcgctctcggcacctgtc
aaacccgcggccgctgtcagcgcgcctccggtgaccccgctgatcagacctgcgcagacg
caggcgcgtgccgctccgcctgcgcagcagagactcgtaacgccgcagctcattgtcaga
ccgccacaacaacaaacaactattcaactgccccctggattcaccatcccaccaggtatg
gttctggtgagaacagagatgggtcagctggtcatggttcctcaacaggctctggctcag
gcccagaacagcatctcaccacgagcatccacacccgccagcgcaagcacattcagggtc
accaccccgcagtctcccgtgagcactcaggccattcgacctgctcccgccgctcagact
aaaatggtctcgtccagttctcccagcaccccggcccagaccagcacctcaaccagtcct
gctaagacccccgtggcagcggtcgtggcagtgacagctccccagcaggtccagccagcc
ttgggccctcagggacccctcactcagatgccactggccccgcagagcgccgccgctccg
gcccccggagcccctgttgtctcccaggagatgcaagagaacgtgaaaaaatgcaagaac
ttcttggcgacgctgatcaaactggcgtcccataattccccgtctcctgagacgtccaag
aacgtgaaggcgctggtgcaggacctgctggacgcaaagatcgatcccgaggagttcacc
agtcgtctgcagtctgagctgaagtcgtctccgcagccttacctggtcccgttcctgaag
aaaagtctgcccgcgctgcgtctgtctcttctgagcagtcagtctctgtcacagccgata
caggcgaataaaaccagcgtgtctcccgtccagacggttgtcagtgttcgtccacagcaa
cccaacagcaccggtctactgtcaccaggcattaagagagcagcgggtcctggggctcag
atacgaatgcctgtggtggtcacgcatacggtgcgagcgacagggactttagggaagcca
tcagccatccaaacgggcagaggcccagcgggcatcaacatccagctctcaggaaaccat
aagaacaggccgaatgacccggggggaggctcattcagggatgacgatgatatcaatgat
gtggcgtctatggctggagtcaacctgaatgaagagagcgctcgaattctcgccacaaac
tctgagctggtgggcacacagatccgctcctgtaaagacgaggccttcttacctacaggt
ctgttacatcgacggatactggagacagcgaagaggtttggagtgacagaagtggcgctg
gaggcggtgaacttcatctctcacgctacccagtccagattacgaacggttctggagaaa
gtttcatccatcgcccagcacagaatggactcgtgtaaggaggatgaatggtacgaacac
gcgtctgatgttcgagctcagctgaagtttttcgagcagttggagcggatggagaaacag
aggaaagacgagcgagagcgagagattctcctcagggcagcgaagagtcgctcgcggcaa
gaagatccagaacaggcccgtctgaagcagaaggcaaaggagatgcagcagcaggaactc
gcccaaatgagacagcgagacgccaatctgacagcgctcgccgccatcggcccgcggaag
aaacggaaggtggattcacccggtgctccaacaacaggctccgaggtgtctggaagttcg
gcaggttctccggccggatcgtcggctccctccagctcatcaaggcagtattcccgacag
agaataacacgcgtcaacctcagggacttcatattctacatggagcaggagagagagacg
aatcgatcgctgctgctctatcgcgctctcctcaagtag
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