Triplophysa rosa: 130563365
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Entry
130563365 CDS
T09216
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
tros
Triplophysa rosa
Pathway
tros04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
130563365 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tros03000
]
130563365 (atrx)
03036 Chromosome and associated proteins [BR:
tros03036
]
130563365 (atrx)
Transcription factors [BR:
tros03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
130563365 (atrx)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
130563365 (atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
130563365
NCBI-ProteinID:
XP_057204799
LinkDB
All DBs
Position
LG13:complement(274665..338569)
Genome browser
AA seq
2021 aa
AA seq
DB search
MTTDICRSSKLNTLVSKLHEFLGHSPDEENFQSHINEISNVQMASNDLNTSDERMNEPGC
STDLTKPSSSRSKRKPSFVTKHTAVEECESEGERPAAADSEHNSVDVNKLPHGTVVVKPE
PLANETEDEFKGPEFRNRGTSKVKDEASRKRPEEKLQEIFNCTACGQQVNHFQRDSVLQH
PALHVLICKSCFKYYMSDDISKDDEGMDEQCRWCAEGGNLICCDYCSNAFCKTCILRNVG
RKALSVIMSEESKWHCYVCKPEPLQDLTKTCEKVLLNLESSQKRNRGDGDKTKRKERKLK
RGKRETAAVNGQDHSSDGAGTLAFSYKTLTVPKELVKKTKKLVETTNGLNRTFIQFLQST
STGLEANALSYRHLRAFGSVLADLRKAHVALEESLEKEFESKGLKFQNGEEQPRTADSQT
AGKALENHHSDGEDDLDSTATHENAQIAEEKREESHSADVEMETGEAQEQSGEDQTKEQS
VTVSPEGQNSSVPADEAALDKDIVSVPPSVPEELFEMVESLAVKKPNEDHSAESSDAKST
SNAEVKDPAKGLAKLGKKLVVKLTPVPLKITIQRDKSKESSEDAPPQEKLNNRRSPRIKT
TPLRKSPEAKSKHKARSKSKEDERGVGVKKECDSDSDEVPEILQTAAMKASSDESDADDD
EDAAGRKKRSSSRLADKTVKRKLIRGSSDSETSDKTSKTKKRNGKKKKGNDSDSSNHNSD
LEKQMKSLSKLGSRKKTSMGVKKEKSECGKEGKKGPKRSFERLRRSQKEKTDAKHDSSSS
DDDDEEQAANSGEDSDQQKIKPIIESVMANIDGFHQSSGDEMDLKAESSQMLDDDDDPEN
RIAKRMLLAQIKANYSSGAESSSSAEDDLDQETTKKDKDDDEDAGKANEEDDETSDSGSD
VDVKKRGRRHHLLRKKLTVSEGDSDDETTAKSKKESNKKSRRKGGTDDSADSDFEESGSA
SSDTSALSEAVSLDEDSEASNKRKTRSSKKSSKDKERSYKKEKKKRRRIKVQDSSSDEKS
GDGEEEGDSDEKGTPKGRKKIRKILKDDNLRTETRDALKEEEERRKRIAERERLREKLRE
TIVVEESAQVTCPITTKLVLDEDEETKEPLLQVHRNLVTKLKPHQVDGVQFMWDCCCESV
RKVEKSGGSGCILAHCMGLGKTLQVVTFLHTVLLCEKLNFSTALVVCPLNTVLNWLNEFS
KWQEGLKDEESLEVTELATVKRPQERAYALQRWQEDGGVIIIGYEMYRNLTQGRNIKSKK
LKEIFQKTLVDPGPDFVICDEGHVLKNEASAVSKAMNSIRTRRRVVLTGTPLQNNLIEYH
CMVTFIKENLLGSVKEFRNRFINPIQNGQCADSTFTDVRVMKKRAHILYEMLAGCVQRRD
YTALTKFLPPKHEYVLAVRMTPIQCKLYRYYLEHFTGVGSALEGGRGRTGTKLFQDFQML
SRIWTHPWCLQLDYISKENKGYFDEDSMEEFIASETEESSMSLTSEEEKPKRKKKRGRGK
DQSSENDSDDLEVIKEWNTSSRGGNPEGRNRAEPPPEEVRPSSNTGPGSPSPDWYKEFVS
EADAEVLEHSGKISLLFEILRMAEAVEEKVLVFSQSLISLDLIEDFLELAGRAKEEGKPS
PYKGEGKWFRNIDYYRLDGSTNAVTRKKWAEEFNDTSNVRGRLFLISTRAGSLGINLVAA
NRVIIFDASWNPSYDIQSIFRVYRFGQVKTVFVYRFLAQGTMEEKIYDRQVAKQSLSFRV
VDQQQIERHFTMNELTELYTFEPDLLDDPSEKKSKRATPMLPKDLVLAELLHSFKDQIVG
YHEHDSLLDHKEEEALSEEDRKAAWAEYEAEKKGFSARFNQPSYSQAGMGPAPGYFPFNV
AALASMSNQQLEDLINQGRQKVLEATSALKSVPREPLEDIISQLWKDNPNLSESQIQSMA
LGRQATCEMELKHREAIYRDVLGKQQTLMMYVQKVISNRKVQEQQMAMARQGMLLNQLAM
QNGLTGPMSQMDLLGLYQQLGALQGLPNPQLGKNPGPSKGV
NT seq
6066 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgacatctgcagatccagtaagctgaacacactggtttctaaacttcatgag
ttcttgggtcattctccagacgaggaaaactttcaatctcacattaatgaaatttctaat
gttcaaatggcttccaatgacttaaacacgtctgatgaaagaatgaatgagcctggttgt
tccacagatttgaccaagccttcatcttcacgctcaaaaagaaaaccttcatttgtgacg
aagcacacagcggtagaggagtgtgagagtgaaggtgaacgtccggcagcagctgacagc
gaacacaacagtgtggacgtcaataaactaccacacgggacggtggtggtgaagcctgaa
ccgcttgctaatgaaactgaagatgaattcaaaggtccagaatttcgtaacagaggaaca
agtaaagttaaagatgaagcgtcacggaaacgtcctgaggaaaaactccaggagattttt
aattgtacagcatgtggacagcaagtgaatcattttcagagggactcggtccttcagcat
ccggctcttcacgttctcatctgcaagtcatgtttcaagtattatatgagtgatgatatc
agcaaggatgacgaagggatggatgaacagtgcaggtggtgtgcggagggaggaaacctg
atttgctgtgactactgtagcaacgccttctgtaaaacatgcattttacgcaacgttgga
cggaaagcgctgtctgtaattatgagcgaggaaagcaaatggcactgctacgtgtgcaag
cctgaaccgctgcaggacttgaccaaaacctgtgagaaagttctgctcaatctggagtct
tctcagaagagaaacagaggcgacggtgacaagaccaaacgcaaagagcgcaaactcaag
cgtggcaaacgggagacagcggccgttaacggacaggatcattcatccgacggagccggc
acgttagccttttcctacaaaacgctgaccgttcctaaggaactggtgaaaaagaccaag
aaacttgtcgagaccaccaacggtttgaatcgcactttcatacagtttctccaaagcacg
tcgacgggcctggaagctaacgccttaagttatagacacttgagggctttcggatccgtt
ctggctgatctgagaaaggcccacgtggctttagaggagtctctggagaaagagtttgaa
tccaaaggtcttaagtttcagaacggagaagagcagccgagaacagccgacagtcagact
gcaggtaaagcgctggaaaaccatcacagcgacggggaagatgatttggattccaccgct
acacatgagaatgctcagatagccgaggagaagcgggaggagagtcattcggctgatgtt
gaaatggagacgggagaagctcaggagcagtccggagaagatcaaaccaaagagcagagt
gtgaccgtaagtcctgaaggtcagaacagctctgtgccagctgatgaagccgctctggat
aaagatatcgtgtctgtaccgccttctgttccagaggaactcttcgagatggtcgagagt
ctcgctgtaaagaaacctaacgaagaccactcggctgaatctagcgacgccaagtccacg
tccaacgctgaggtgaaagatcctgccaagggtctcgccaaactgggtaaaaagctcgta
gtcaagctgacgcccgttcctcttaaaatcaccatacagcgagacaaaagcaaagaatcg
tcagaggacgcacctccacaggagaagctaaacaacagacgctcgcccagaataaagacc
actcccttacgcaagtctccagaggccaagagcaaacataaagccagatcaaagtcaaaa
gaagacgagcgtggtgttggagtcaagaaggaatgtgattcagactcggatgaagttcct
gagatcctgcagacggccgctatgaaggccagctcggatgagagtgacgctgatgatgat
gaggatgctgctggcaggaagaagaggtcatccagccgcttggctgacaagaccgtaaaa
cgcaaactcatccgaggctcctccgactctgagaccagtgacaagacttcaaagactaag
aaacgaaacgggaaaaaaaagaagggcaatgactcggactcctccaaccacaactctgat
ctggagaaacagatgaagagtctgagcaagctcggcagcaggaagaaaacatccatgggt
gtgaaaaaagaaaagagtgaatgcggtaaggagggcaagaagggtcctaaacgatcattc
gagcgactgcgcaggtcacagaaagaaaagacggatgctaaacacgattcatcctccagt
gatgatgatgatgaagaacaggctgccaactcgggagaagacagcgatcaacagaagatc
aaaccaatcattgaatctgttatggcaaacattgatgggttccatcagtcgtcaggtgac
gagatggatttaaaggctgaatcctcacagatgctggatgatgatgatgacccagagaac
aggattgccaagagaatgcttctggctcagatcaaagccaactactcatctggagcggag
tcgtcatcatcagcagaagacgacctggaccaagagacgacaaagaaagacaaagatgat
gatgaggacgctggcaaagcaaatgaagaagacgacgagacgtcagactccggctcagat
gttgacgtaaagaagcgtggacgccgtcatcatttgctgcggaagaagctgacggtaagc
gaaggcgactctgatgatgagacaacagctaaaagcaagaaggagagcaataaaaaaagc
cgaaggaaagggggcactgatgactctgcagattcagactttgaggagtcgggttcagcc
tccagtgacacctcggccctcagtgaagctgtcagtctggatgaggacagcgaggcgagt
aacaaacgcaaaacacgatcatccaaaaaatccagtaaggacaaagagagaagctacaag
aaagagaagaagaaacgacggcgtattaaagttcaagactcatcatcagatgaaaagagc
ggagacggggaggaagagggggacagtgatgagaaaggaacgcccaaaggccgcaagaag
atccgcaagatccttaaagacgataacctgcggacagagaccagagacgctctgaaagaa
gaagaggagaggaggaaacgcatcgccgagagagagagattgagagagaaactccgagag
acgattgtagtggaggagtctgcacaggtcacatgtcccatcaccacgaaactggtgctg
gatgaagatgaggagaccaaagagccgctgttgcaggttcacaggaatctggtgaccaaa
ctcaaaccacatcaagtggacggtgttcagttcatgtgggactgctgttgtgagtcggtg
agaaaggtggagaagtctggcggctccggctgtattctggctcattgtatgggtctgggt
aaaaccctgcaggtggtgacgtttcttcacactgttctgttgtgtgagaagttgaacttc
tccacggctctggtggtttgtcctctcaacaccgtgctcaactggctgaatgagttctcg
aagtggcaggagggcctgaaagacgaggagagtttagaggtgacagagctggccacggtg
aagagacctcaggagagagcgtacgctctgcagcgctggcaggaggacggcggcgtcata
atcatcggttatgagatgtatcggaacctgacgcagggccgaaacatcaagagcaagaaa
ctgaaggaaatcttccagaaaactctcgtcgatccaggtccagattttgtgatctgtgat
gagggtcacgtgctgaagaacgaagcgtctgcggtttctaaagccatgaactccatcagg
actcgacgacgagtggtgctgacaggaaccccgctgcagaataatctcatcgagtatcac
tgtatggtgaccttcatcaaagagaatctgctgggttcagtgaaagagttcagaaaccgc
ttcataaaccccattcagaacggccagtgtgccgactccaccttcactgatgtccgcgtc
atgaagaaacgagctcatattctctatgagatgttggccggatgtgtacagaggagggac
tacactgctctcacaaaattcctgccacccaaacatgagtatgtgctggcggtgcgaatg
acgcccattcagtgcaaactctatcgatactacctggagcacttcacaggtgtgggttct
gctctggagggaggaagaggccgcacggggaccaaactcttccaggatttccagatgctc
agcagaatctggactcatccgtggtgccttcagctggactacatcagtaaagaaaacaag
ggatactttgatgaggacagtatggaagagttcatcgcttcagagacggaggagtcctcc
atgagtttaacctctgaagaggagaaacccaaaagaaagaagaagcgtggcagaggtaaa
gatcagagttcagagaatgacagcgatgatctggaggtgataaaagagtggaacaccagc
tctcgaggaggaaaccccgagggacggaaccgagccgagccgccgccggaggaggttcgg
ccctcgtcaaacacgggtcccggcagcccgtcaccagactggtacaaagagtttgtgtct
gaggctgatgctgaagtgctggagcattctgggaagatttcgcttctgtttgaaatcctg
cgcatggctgaggctgtagaagagaaagtgttggtgttcagtcagtcgctcatttctctg
gacctcattgaagattttctggagttggcgggcagagccaaagaggaagggaaaccttca
ccgtacaaaggtgagggcaagtggttcagaaacattgactactaccggctggacggatcc
actaatgccgtgaccagaaagaagtgggcagaagagtttaacgacaccagtaatgttcgc
ggtcgactgttcctcatctcaaccagagccggttctctcggcatcaacctggtggctgcc
aacagggtcatcatatttgatgcctcgtggaacccatcctacgacattcagagtattttc
agggtctatcgcttcggtcaggtgaagacggtgtttgtctacaggttcttggctcaggga
accatggaggagaagatctatgaccggcaggtggccaaacaatcgctgtctttccgtgtg
gtagaccagcagcagatcgagcgtcacttcaccatgaatgagctgacggagctctacacg
tttgaacccgacctgctggacgatccgtctgagaagaagagcaagagagccacgcccatg
ctgcccaaggatcttgttctggctgaactcctccacagttttaaagatcagatcgttggc
tatcacgagcacgactctctgctggatcataaggaggaggaggcactgagcgaggaagat
cgcaaggcggcttgggccgagtatgaggctgagaagaagggtttctccgcgcgattcaac
cagccgtcttattctcaagctggcatgggaccggcaccaggctacttccccttcaacgtg
gcagccttggcctccatgagcaaccaacagctggaggatttgattaaccagggcagacag
aaggtgttggaagccaccagcgctctgaagtccgtacccagagagcctttggaggacatc
atctctcagctgtggaaggacaaccccaatctgtccgagtctcagattcagtccatggct
ctgggacgacaggccacctgtgagatggagctcaagcacagagaggccatttaccgtgat
gtcctcggcaaacaacaaaccctgatgatgtacgtgcagaaggtgatctccaaccggaag
gtccaggagcagcagatggccatggcgcgacaggggatgctgctcaaccagctggccatg
cagaacggtctgacgggacccatgagtcagatggatctgctggggttatatcagcagctc
ggagccctccagggcctgcccaacccccagctgggcaagaaccccggcccatccaagggt
gtgtag
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integrated database retrieval system
