Triplophysa rosa: 130563390
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Entry
130563390 CDS
T09216
Name
(RefSeq) synaptopodin 2-like protein
KO
K21112
synaptopodin
Organism
tros
Triplophysa rosa
Pathway
tros04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
130563390
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Gene cluster
GFIT
Motif
Pfam:
Calsarcin
Motif
Other DBs
NCBI-GeneID:
130563390
NCBI-ProteinID:
XP_057204837
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Position
LG13:19360171..19378615
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AA seq
947 aa
AA seq
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MDYKHEPVRRGDSWGGPTATSSTPDRAVGEKSLERTWILEKDDHCGVKGKPDLTTCISQV
ERKTNLSRSASLSEKELKEARTKSQIIAAQLQANSNSKGVQLFNRRRQRVNAFTLVSVGG
GGAEESKNVIDSPSKGPWDKPHTAKDHKELNHRNLTWSAGKIYGGGCNMEDVSEVVREDV
VEERERHFLPVNEKDEELSEGLTEAVKDEITSGSDSNTVVLDSVAQEEPQENGGHAHSVD
TNKDLNGYSTQCNGKITKAVTTKTSIINRTARPFFSPTTVGSSEVVSPVMDIPPAPSYDS
PPLPPFQEPPTTYFQPQSFTAHTRPVFSQPPPPPSYPTPPLPSYSIPPPPDTAIAPSPQP
SSCYICPSAPRPTFVPELLTKKRSVTPIKTGILDEGMARRATRKSMFTFQEKPKVAPNPE
LLSLVQGADEKKKQKAQPDPSQEEELLALGAEASNFLAKEEVVHKDALVPEWASCLKSSR
THARTEHKPEQALTNASGKGAELFAKRQSRMERYVHDSKEQRRSPSPTMSLPPSWVYPSN
MPGRVKAIVNSSNVSAQISMTLKAHHGTQKKTPVKTPEPSPAPEVPLENGCTKIEMELSK
HQPYQLNSSLFIFNPTKDPYSTLPRAAPPPKPVMTGYTFSRQTSLPTSQLPSPYSPSAAY
RSTHCFSPPMMPCSPCISSPVSPLAPERVASPRSGVQVPRPTFSAKKAGITPQIKEETPI
PITSPGSTTPTSWTPNLTRRFTSPDVLSSAVWSPSSPVVTSTSTNPIYKPTPTSHSPRPI
HKLATTSPSPGTIFKPPATSPLSPPWENRCHSPAVIQDTKANHRILAKNIINAAKRKNSP
SPGALSGHSLPISPVSAGTSPNDHKPVSPFQPRMLGAQSPTLTSPSPTHMIHSPVRLYNT
RSLTDSDASVESEDSGLRSPGVRSYKTCPRGWTASLQVKRGSVPEDL
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atggattataaacatgaaccggtgaggagaggggacagctggggtgggccgactgccaca
tcatccacccctgacagggctgtaggagagaagtccctggagagaacctggatcttggag
aaagatgaccactgtggggtcaaaggaaaaccagacttgacgacgtgcatcagccaggtg
gaacggaaaacaaacctcagcagaagtgccagtttgtcagagaaagagctgaaggaggcg
cgaaccaaaagtcagatcatcgctgctcagctccaggccaactccaactccaaaggtgtc
cagctcttcaatcgccgtagacagagagtaaacgctttcacgcttgtgagtgtcggagga
ggcggagcagaagagtccaagaatgtaattgactcaccttctaaaggtccatgggacaaa
ccacacacagctaaggaccacaaggagttaaatcacagaaatctcacgtggtcagccgga
aaaatctacggtggtgggtgcaacatggaggatgtaagcgaggttgtgcgtgaggatgta
gtcgaggagcgtgaaagacactttctccctgtcaatgagaaagatgaggagctttcagaa
ggtcttacagaagcagtaaaggatgaaattacttctggaagtgacagtaatacggtagtt
ttggacagcgttgctcaggaggaacctcaggaaaatggaggacacgctcactctgtagat
accaataaagacttgaacggatacagtacgcagtgcaatggaaaaataaccaaggcggtg
acaacaaaaacctccattatcaaccgaacggctcggccatttttctccccaacaacagta
ggctcttcagaagttgtaagtccagtgatggacatcccaccagctccatcctacgactcc
ccaccgttaccccccttccaagagccccctaccacatactttcaaccacaatctttcaca
gcacacacacgacctgtcttctctcaaccaccccctccgccttcatatccaactcctcca
ctcccatcctactccatcccacctccacctgacacagccatcgctccctcaccccagcct
tcctcgtgctatatttgcccatctgcccccagacccacatttgttcctgagctcttgacc
aagaagaggtctgtgacgcccatcaaaaccggcatcctcgatgagggcatggctcgccga
gcaacccgcaagtccatgttcacatttcaagagaagccaaaagtagctccaaaccctgaa
ctcctctccttggtgcaaggagccgatgagaagaagaaacagaaagcccagccagatcca
tcacaagaggaggagctgctggctctcggcgccgaagcctcaaactttctagccaaggag
gaggttgttcacaaggacgcgttggtgccagagtgggcctcgtgtttgaagagctccagg
acgcatgccaggacagagcacaagcctgagcaggccctcaccaacgcttcagggaaagga
gctgaactgtttgccaaacgccagtctaggatggaaaggtacgtccatgatagcaaggag
cagaggaggtctccctctccgaccatgtctttaccgccatcctgggtgtatccatctaac
atgcctggtcgtgtcaaagccatcgttaactcttcaaacgtcagtgcacagatttcgatg
acgctgaaagctcaccacggcacacaaaaaaagactccggtcaaaacgccagaaccttct
ccggctccagaggtgcctttggagaacggctgcactaaaatcgagatggagctgtcgaaa
catcagccataccagctcaactcatctctcttcatcttcaacccaactaaagatccatat
agcactcttcccagagcagccccgcctcctaagcccgtcatgacaggctacactttctcc
aggcaaacctcgcttcccacaagtcaattgccatcaccatacagcccttctgctgcctac
aggtccacccattgcttttctcctcccatgatgccttgcagtccctgcatcagttctcca
gtgtctcctttagctccagaaagagtggcatcgccccgctctggcgtccaggtgcccaga
cccacgttctcagccaaaaaagctggtatcaccccacagatcaaggaggaaaccccgata
ccgatcaccagccctggttccacaaccccgacttcctggacacccaacctcacacgacgc
tttaccagtccagatgtgctgtccagtgcagtctggtctcccagcagccccgtggtgacc
tccacatccactaaccccatctacaagcccacaccaacctcccattccccccgaccgatc
cataagctcgccacaacttctccatctccgggaaccatcttcaaaccacctgccacctct
cctctatctccaccctgggaaaacaggtgccactccccggccgtcatccaggacaccaaa
gccaaccaccgaattttggccaaaaacatcatcaatgctgccaagagaaaaaacagtccg
tctccaggtgctctgagcggacacagcctgcccatctccccggtgagcgctggcacctca
cctaatgatcacaaacctgtaagcccctttcagccacggatgctgggcgctcagtcgccc
acccttaccagcccatctcccacccatatgatccactctccggtgcgcttgtacaacact
cgctctctaactgattctgatgcctcggtcgagtcagaggattcgggtctgcgctcgcct
ggggtgcgcagctacaaaacctgcccccgtggatggacggccagtttgcaggtgaagaga
gggagcgtgcctgaggatctgtag
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