Triplophysa rosa: 130563490
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Entry
130563490 CDS
T09216
Symbol
cul4b
Name
(RefSeq) cullin-4B
KO
K10609
cullin 4
Organism
tros
Triplophysa rosa
Pathway
tros03420
Nucleotide excision repair
tros04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130563490 (cul4b)
09124 Replication and repair
03420 Nucleotide excision repair
130563490 (cul4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tros04121
]
130563490 (cul4b)
03400 DNA repair and recombination proteins [BR:
tros03400
]
130563490 (cul4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tros04147
]
130563490 (cul4b)
Ubiquitin system [BR:
tros04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
130563490 (cul4b)
DNA repair and recombination proteins [BR:
tros03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
130563490 (cul4b)
TCR (transcription coupled repair) factors
Cul4-CSA complex
130563490 (cul4b)
Exosome [BR:
tros04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130563490 (cul4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
Motif
Other DBs
NCBI-GeneID:
130563490
NCBI-ProteinID:
XP_057205020
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Position
LG13:12765498..12773144
Genome browser
AA seq
859 aa
AA seq
DB search
MFPTGLPSPNPPSPAQEPRPAASDVHNDSSLTSSKKRKINSSEKEDIDSISSSPKAICNS
SSTTSCSSTTSQQHNKKLRFEDSVDFIGLDVKMAEESSNPSASCSKAKNVFLPGGVGHHA
NGLTKSAGSSTFSNSKPGAAKKLVIKNFKEKPKLPENYTNETWQKLKEAVEAIQNSTSIK
YNLEELYQAVENLCSHKISAKLYKQLRVVCEDHIKAQIDQFREDALDSVLFLKKIDKCWQ
DHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRSYIISDLKVQSKTIDGILLLI
ERERSGEAVDRTLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQRLMQEREVPEYL
HHVNKRLEEEADRVITYLDQSTQKPLIATVEKQLLGEHLTAILQKGLNNLLDENRIQDLS
LLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDICF
MKNEKFVNGMKEAFETFINKRPNKPAELIAKYVDSKLRAGNKEATDEELEKMLDKIMIIF
RFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMEL
SKDIMVQFKQHIQCQNIPGNIELTVNILTMGYWPTYVPMEVHLPPEMVKLQEIFKTFYLG
KHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEEFSLEDIKLATGIE
DGELRRTLQSLACGKARVLMKTPKSKDVEDGDKFSCNDDFKHKLFRIKINQIQMKETVEE
QASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIESLI
DRDYMERDKENPNQYNYVA
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgtttccaacaggtttaccttcccctaatcccccatcgccagcccaagagcccagaccc
gcagcttctgatgttcacaacgacagtagcttaacgtcttctaagaagagaaaaattaac
agttccgagaaagaagacattgattcaatatcttcgtctccgaaagccatttgcaattca
tcctctaccacgtcctgctcttccactacttcgcagcaacacaacaagaagttgagattc
gaggactcggtggatttcatcggactggatgtaaagatggccgaggagtcgagtaatcct
tctgcatcttgttcaaaagcaaaaaacgtgttcctgcccggaggtgtggggcatcatgcg
aacggactcacgaagtctgcgggctcctctacattctcaaacagtaaacccggtgctgca
aagaaacttgttatcaagaattttaaagaaaaaccaaaattaccagagaattacacaaat
gagacctggcagaagctaaaggaggcggtggaagccatacagaacagcacttcaataaaa
tacaaccttgaagaactttatcaggctgttgaaaacctgtgttcacataagatatctgcc
aagctctataaacagctcagagtggtttgtgaagaccatatcaaggcccagattgaccag
ttcagagaggatgctctagacagtgttctctttctgaagaaaatagacaaatgttggcaa
gatcactgcagacaaatgattatgataagaagtatatttttgtttttggatcgcacatac
gttttacaaaattcaatgctgccctcaatctgggatatgggtttggagttgtttcgttcc
tatatcatcagcgacctaaaggtgcaaagtaagacaatcgacgggattctgcttcttatt
gagagagagcgaagtggagaggccgtagaccgtactctcttgaggagtcttttgagcatg
ctgtcagatctgcagatatatcaggattcatttgagcagcgttttctggaagagacaaat
cgactgtatgctgcagagggccagaggctcatgcaggagagagaggtgccagaatatctc
catcatgttaataaacgtctagaagaggaggctgacagagtcatcacatacttggatcag
agcacacaaaaacccctcattgccacagtagaaaagcaactacttggagaacacctcact
gcaatactccagaaaggtttgaataacctgctggatgagaaccgtattcaggatctgtct
ctgctgtatcagctcttcagtcgtgtcaggggtggtgtgcaggttctcctgcaacattgg
atcgagtacatcaaggcctttggaagcacaatcgtcatcaacccagagaaagacaagacg
atggtacaggagcttctggatttcaaggataaagtcgatcacatcattgacatatgcttc
atgaagaatgagaagtttgtgaatggcatgaaggaggcgtttgagacctttatcaacaaa
cggccaaacaaacctgcagagctcatagcaaaatatgtggattcaaagcttcgtgcagga
aacaaggaagcaaccgatgaggaacttgagaaaatgttggacaagataatgatcatattc
aggttcatttatggcaaagatgtttttgaggcattctacaagaaagatttggcgaagagg
ttactggtgggaaagagtgcttctgtagatgcggaaaaatcaatgttgtccaaactgaag
catgaatgcggagctgcatttaccagtaagctggaaggaatgttcaaagacatggagctt
tcaaaagacattatggtccagttcaaacagcacattcaatgtcaaaatattcctgggaac
attgagctgacagtgaacattctcacaatgggttattggccaacttacgtccccatggag
gtgcatctcccaccggagatggtgaaactgcaggagattttcaagacattttacctgggc
aaacacagtggacggaagctccagtggcagtcaacattaggacactgtgtgcttaaggca
gaatttaaagagggcaagaaagagctccaggtgtcactgtttcagacgttagttctgctt
atgtttaatgaaggggaggagttttctctggaggacattaagctggctacaggcatcgag
gacggcgagctgaggcggaccctgcagtcactagcctgcggaaaagcacgcgttcttatg
aaaaccccaaagagcaaagatgtggaagatggagacaagttctcatgtaatgatgatttc
aaacacaaactcttcaggattaaaatcaaccagatccaaatgaaagaaacggtggaagag
caggccagcactacagagagagtattccaagaccgtcagtaccaaatcgacgccgccatc
gttcgaatcatgaagatgaggaagactctcagccataatcttctggtgtctgaggtgtac
aaccaactcaaattcccagtcaagcctgctgatctaaagaagaggatagagtcacttatt
gacagggactacatggaaagggataaggaaaatcccaatcaatacaactatgtggcttaa
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