Triplophysa rosa: 130563554
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Entry
130563554 CDS
T09216
Symbol
abca1b
Name
(RefSeq) phospholipid-transporting ATPase ABCA1b
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
tros
Triplophysa rosa
Pathway
tros02010
ABC transporters
tros04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
130563554 (abca1b)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
130563554 (abca1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tros02000
]
130563554 (abca1b)
Transporters [BR:
tros02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
130563554 (abca1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
130563554
NCBI-ProteinID:
XP_057205124
LinkDB
All DBs
Position
LG13:20939359..20971661
Genome browser
AA seq
2281 aa
AA seq
DB search
MSVSTQLGLLLWKNFTYRRRQTLQLLTEIVWPLFIFFILIAVRLNYPPYEQHECHFPNKA
MPSAGTLPWLQGIVCNANNPCFRHPTPGESPGVVGNFNDSIISRLFSDAKKILLYSQNDR
SLDGFNELISAVKDMQLGSAGFKLKDFLRENETLSAFLRENASFTQHSVKHILEAQVNLE
KVLIKGFGVHLKEMCRSAKLEDFVTISDEEVARRTQDIICSSSSTWLDQAESHFKSNLDF
IKPLRPDVRINASDVRQVSKATDNLLESLGSLAAELASMRSLSDLRNEILFLTENATGSP
SMMYQAVSRIVCGHPEGGGLKIKSLNWYEDSNFQALFGSHNNSDDEPVTVYDNTSTPYCN
NMMRNMETNPISRMIWRALKPLLMGKILYTPHTPATQKIIHEVNKTFQELGILRDLGGMW
EETRPKVWNFMENSEEMDLMRTLLRNNVTANFFSDKLAGTQWSVEDVVSFLSKHSEDTRP
HGTAFTWRDVFNETDQAIMSISRFMECVNLDKLEPVSTEEKLLNESISLLDNRKFWAGIV
FLDIPPNSSELPPQVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFSYLQ
DVIEHSIIRALTGTKEKTGVYIQQMPYPCYVDDIFLRIMSRSMPLFMTLAWMYSVAIIIK
GVVYEKEARLKETMRIMGLDNGILWFSWFISSLIPLLVSAGLLVLLLKMGNLLPYSDPGV
VFLFLASFAVVTIMQCFLISTAFARANLAAACGGIIYFTLYLPYVLCVAWQDYVGFTAKV
IASLLSPVAFGFGCEYFALFEEQGIGIQWNNLFSSPMEEDDYNLTNCLILMYFDAFLYGV
MTWYIEAVFPGQYGIPRPWYFPFTKSYWFGENNTKNTTVHGKKGNSGAVCIEEEPTHLEL
GVYIENLVKVYRHGRKLAVDGLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTA
YIMGKDIRSELSSIRQSLGVCPQHNVLFSMLTVEEHIWFYARLKGLSEEEVKAEMEQILG
DTGLPHKRKSRTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLLKY
RAGRTILLSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTHLGTGYYLTLVKKNAEAS
LSSCRNSSSTVSFVKKEDDTSESSSDAGLGSDQESEAATAIGTTWPESPVVPVDVSLITS
LILKHVTAARMVEDLGHEITYVLPYESAKNGAFVKLFHDLDDRLADLGISSYGVSDTTLE
EIFLKVAEDSGVDTEISDGTLPIRRRRQHAFGADHQSCLKPLTEDDNSDSNDSDADPESK
ESDHLSVADGKGSYQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIALV
FSLIVPPFGKYPSLALNPWMYEEQFTFISDDAPDDISTQKLLGALMDDPGFGTRCMEGEP
VPDAPCTMGDEDWSTPDLPESVSDIFRTSNWTMDNPSPACECSRDGKKKMLPECPAGAGG
LSPPQIKISQMDTLQNLTGRNISDYLVKTYVQIIGKSLKNKIWVNEFRYGGFSLGARSTQ
VLPPAEEIDDAISRVRQIFQLKKNSGSAADRFLSSLSSFINGLDTKNNVKIWFNNKGWHS
IGAFLNVMNNGILRANLPPGKDPRQFGITAFNHPLNLTKEQLSQVALMTTSVDVLVSICV
IFAMSFVPASFVVFLIQERVNKAKHMQFISGVQPYLYWQANFLWDMCNYVVPATLVILIF
VCFQQKSYVSATNLPVLALLLLLYGFSITPLMYPASFLFKIPSTAYVVLTRVNILIGING
SISTFVMELFGNNEIGGINDILKNVLLIFPHFCLGRGLIDMVKNQAMADAMERFGEDRFR
SPLEWDMVGKNLFAMAVEGVVFFIFTVLIQYRFFFKPKSFSAKLSPIGEEDEDVARERQR
IVSGAGQGDILELRQLTKVYKRKEKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTG
DSMVTKGEAFLAGKSILREIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEEEV
CEVAEWGIRKLGLVKYVDKNAGSYSGGNMRKLSTAISLIGAPPVVFLDEPTTGMDPKARR
ALWDCIHSVIKEGRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTI
ILRVAGPDPDLQPVMKFIESELPGSTLKEKHRNMLQYQLSSSLTSLAHIFSILAKNKEFL
RIEDYSVSQTTLDQVFVNFAKDQSDDHCDNSIRRKETGVNMALLNPLSHVENMEKPKESF
V
NT seq
6846 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtttctactcagctgggtctgctgctgtggaagaactttacctacagaagaaga
caaacactacaactgctgacggagattgtgtggcctctatttattttcttcatcttgatt
gctgtgaggttgaactacccaccttatgaacaacatgaatgtcactttcccaacaaagcc
atgccctcagctggcaccctgccctggctccagggcattgtctgtaatgccaacaatccc
tgcttccgacacccaacccctggggaatctccaggagttgttgggaacttcaatgactcc
ataatctcacgtctgttttctgatgccaagaagattttgctgtacagtcagaatgacagg
agcttagatggattcaatgagcttatcagtgctgtaaaagacatgcaactggggtcggcc
ggtttcaagctgaaggacttcctacgggaaaatgagaccctgtccgcgttcctccgggag
aacgcctcctttacccagcattctgtaaagcacattctggaagcacaggtgaatctggaa
aaggtcctgatcaaaggttttggtgtccatctgaaagaaatgtgcagatccgccaagctt
gaagattttgtgaccatctcggatgaggaggtggctagacgcacacaggacatcatctgc
tcatcttccagcacctggttagaccaggctgagagtcactttaagtccaacctggacttc
attaaacctctaaggccagatgtgaggattaacgccagcgatgtccgtcaagtttctaaa
gccacagacaaccttctggaaagtttgggatcactggctgcagagctggctagtatgaga
agcttgagcgatctacgaaatgagatcttgtttctgacggaaaacgccacgggttcgccc
agtatgatgtaccaggctgtgtctcgcatcgtctgtggacacccggagggcggcggcctt
aagatcaaatccctcaactggtacgaggacagcaacttccaggcactgttcggcagtcac
aacaacagcgatgatgagccggtgactgtttacgacaacacctccactccatattgcaac
aacatgatgaggaacatggaaaccaaccccatctctcgtatgatctggagagccttaaaa
ccccttctgatggggaagattctttacactccacatacacctgcaacacagaagatcatt
catgaggttaataagacatttcaggagctcggaattcttagagatttaggtggaatgtgg
gaagaaaccaggccaaaggtttggaactttatggagaacagtgaagaaatggatctaatg
cggactcttctacgaaacaacgtcactgcgaatttcttcagtgataagttggccggtaca
cagtggagtgtggaggatgttgtaagcttcttgtccaagcattctgaagacacacgaccc
catggaacggcattcacgtggagggatgtcttcaacgagactgaccaggccattatgagc
atatcccgtttcatggagtgtgtaaatttggataaactggaaccagtgagcacagaagag
aaactgttgaacgaatccataagtctgctggataacagaaagttctgggctggaattgtg
tttctcgacataccccccaacagttcagagctccctccacaagtcaattacaagatccgc
atggacatcgacaatgtggaacgcacaaacaagattaaagacgggtattgggaccctggt
cccagggctgacccgtttgaagatctccggtacatttggggaggattttcataccttcag
gatgttatcgaacacagtattatcagagcacttactgggacaaaagagaagactggtgtc
tacatccaacagatgccatacccatgctatgtagatgacatttttctccggattatgagt
cgatccatgcctctcttcatgactctggcctggatgtactcggtggctatcatcatcaaa
ggtgtcgtctatgagaaggaggcccggctcaaggagaccatgagaattatgggattggac
aatggaatcttgtggttcagctggttcataagtagtctgattcctctactggtcagtgca
ggactgctggttcttcttctcaagatgggtaatctcctgccatacagtgaccccggcgtt
gtcttcctcttcctcgcatcatttgccgtcgtaaccatcatgcagtgcttcctcatcagt
acggcgttcgctcgcgccaacctggcagccgcctgcgggggcatcatatacttcaccctt
tatctgccttatgtactctgcgtggcctggcaagactatgtgggcttcactgccaaagtc
atcgctagcttgctgtctccagtggcgtttggctttggttgtgagtatttcgctctgttt
gaggaacaggggattggcattcaatggaacaacctcttctccagccccatggaagaagat
gactacaacctcaccaactgcctcatactcatgtactttgatgccttcttgtacggcgtc
atgacctggtacatagaggccgtgttcccgggacagtacggcattcccaggccctggtac
ttcccgttcactaaatcctactggtttggagagaacaacacaaagaataccactgtacat
ggaaagaagggcaattctggagccgtttgcattgaagaggaacccactcaccttgagctt
ggagtttacattgagaatctagtgaaggtgtatcgtcacggcaggaagttggcggtggac
ggtttgacgctcggcttctatgagggtcagataacctcattcctcggccacaacggcgct
ggaaaaaccaccacaatgtcgattctgactggcctctttcctccgacctctggcaccgct
tacatcatgggcaaagacatccgctcagagctgagctccatcagacagagcctcggtgtg
tgtccacaacacaacgtcctcttcagcatgttgaccgtggaggagcacatctggttctac
gctcgtctgaagggtctgtcagaggaggaggtgaaggctgagatggagcagatcttgggc
gacaccggccttccacataaacgcaaatcgaggacaagccagttgtcaggtggtatgcaa
aggaaactctccgtagcccttgcgttcgttggtgggtcaaaggtcgtcattctggacgag
ccgacagccggtgtggacccgtatgctcgcagaggcatctgggaccttcttcttaagtat
cgtgcaggtcgtaccatcctcctttccacccatcacatggatgaggcggacattctgggc
gatcgcattgccatcatctcccatggaaagctttgctgcgtgggctcctctctctttctg
aagacgcatctgggaacgggatactatcttactctggtgaagaagaacgcagaagcttct
ctcagctcctgcagaaactcaagcagcactgtgtcttttgttaagaaagaagacgataca
tcagagagcagttcagatgctggtcttggaagcgaccaggagagcgaagccgccacagcg
attggaactacgtggcctgaatctcccgtcgttcctgtagatgtgtccctcatcaccagt
ctgatcctcaagcacgttactgctgcccgaatggtggaggatcttggtcacgagatcaca
tatgtgttgccgtacgagtctgccaaaaatggtgcttttgttaaactcttccacgacctg
gatgaccgcctcgctgacctgggcatttcaagctatggagtgtcagataccacacttgaa
gagattttccttaaagtggcagaagatagcggggttgacacagaaatctccgatggaact
ctgccgatacgcagacgcagacaacatgcatttggtgcggaccatcagagctgcctcaaa
cccctgactgaagatgacaattctgacagcaatgattctgatgctgacccagaatccaaa
gagtccgatcatttgagtgttgctgatggtaaaggatcatatcaagtgaaaggctggagt
ctaaagaggcagcagtttgtggctttattatggaagagatttctttacgctcgtcggtca
aggaaaggcttctttgcgcagattgtacttcctgctgtgtttgtgtgcatcgcgcttgtt
ttcagtcttattgttcccccttttggaaaatatcccagtctggctctgaatccatggatg
tatgaggagcaattcacattcatcagtgatgatgcacctgatgacataagcacacaaaaa
ttactcggcgctttaatggatgaccctggttttggaacacgatgcatggaaggtgaaccc
gttcctgacgcaccttgtacgatgggagatgaggactggtccactccagaccttccagag
agcgtttctgacattttccggacgtcaaactggaccatggacaatccgtctcctgcttgt
gagtgcagccgtgatggcaagaagaagatgctcccagaatgccccgcaggggccggtgga
ctttcacctccacagattaagatcagccaaatggatacactccaaaatctgacagggcga
aacatctcagactacctcgtgaaaacctacgtgcagatcattgggaaaagcttgaagaac
aaaatctgggtgaacgaattcaggtacggaggattttcactgggtgcgagaagcactcag
gtccttccgcccgctgaagagatcgatgatgcaatctctcgggtcaggcagatctttcag
ctgaagaagaactcaggctctgcagccgatcgtttcttgagcagtctgtcttcctttatc
aatgggctggacaccaaaaataatgtcaagatatggttcaataacaagggctggcacagt
attggagcttttctaaatgttatgaacaacggtatcttgcgtgccaacttaccacctggt
aaagacccccgtcagtttggcatcactgcatttaaccatccgctcaatctgaccaaagag
cagctctctcaagtcgcactaatgactacctctgtggatgtgttggtgtccatctgcgtg
atcttcgccatgtccttcgttcctgccagcttcgtggtcttcctcattcaggagcgagtg
aataaggccaagcacatgcagtttatcagtggagttcaaccgtacctttactggcaggcc
aactttctctgggatatgtgcaattacgttgttcccgctactctagtcatcttgatcttt
gtctgcttccaacaaaaatcatacgtgtctgccaccaacctgcccgttcttgctcttctc
ctgcttctctatggattttccattactcctctcatgtacccagcgtccttcttattcaaa
atccccagcacagcttacgtggttctcacaagagtcaacattctcattgggatcaacggc
agcatctctactttcgtaatggagctgtttggaaataacgagattggtggcattaatgac
atcctgaagaacgttttattgatcttcccccatttttgcctcgggcgaggtctcattgac
atggtgaagaaccaagccatggctgacgccatggagagatttggtgaggaccgtttccgt
tctccgctggagtgggacatggtgggcaagaatttatttgccatggcggttgaaggagtc
gtcttcttcatcttcactgtcctcatccaataccgtttcttctttaaaccaaagtctttt
agtgccaagctgagtccgattggagaagaagatgaggatgttgccagagagaggcagagg
attgtcagcggagctggtcaaggagacattctggaacttcgacaactcactaaggtgtat
aagaggaaggagaaacctgctgtggatcgtctctgtgtaggcattcctccaggagagtgt
tttggtctcctcggggtcaacggagctggaaaaacaagtacttttaaaatgctgacgggt
gattctatggtcactaaaggtgaagctttcttagcagggaagagtattctcagagaaatt
gatgaagttcatcagaatatgggctactgccctcagtttgatgccattaatgacctccta
accggacgagaacacctggaattctatgctattctgcgtggcgtacccgaggaggaagtt
tgtgaggtggccgaatggggaatccgcaaactgggtctcgtgaagtatgtggacaaaaac
gccggaagctacagcggtggcaacatgcgcaaactctccacagccatatctctcatagga
gctcctccagtggtcttcctggatgagcccaccacaggcatggaccccaaagcccggcgg
gcgttgtgggactgcatccacagtgtcatcaaagagggccgctctgttgtgcttacctca
catagcatggaggaatgtgaagctctgtgcactagaatggccatcatggtgaatggccgg
ttccgctgtctgggcagcgtccaacacctgaagaacagatttggtgatgggtacaccatc
attctgagggtcgccggtccagatcctgaccttcagcctgtaatgaagtttatcgagagc
gagctacccggcagcactttgaaagagaaacatcgaaacatgctccagtaccagctctcc
tcttccctcacgtccctcgctcacatcttcagcatcctcgctaagaacaaagagtttctc
aggatagaagattattctgtgtcccagaccactctggaccaggtgtttgttaactttgcc
aaagaccaaagtgacgatcactgcgacaactccattcgtcgtaaagagacgggggttaac
atggcattactgaacccactgtctcatgtagagaatatggagaagccaaaagaaagcttt
gtgtga
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integrated database retrieval system
