Triplophysa rosa: 130563641
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Entry
130563641 CDS
T09216
Symbol
col23a1a
Name
(RefSeq) collagen alpha-1(XXIII) chain isoform X1
KO
K24355
collagen type XXIII alpha
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tros00536
]
130563641 (col23a1a)
Glycosaminoglycan binding proteins [BR:
tros00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
130563641 (col23a1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
130563641
NCBI-ProteinID:
XP_057205312
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Position
LG13:complement(21002013..21110068)
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AA seq
481 aa
AA seq
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MQHRYQVLLGNVEEEVTLGPLGLDGKPGPPGPKGSQGLPGPKGDKGDQGDTGPRMVFPRY
DHGYISADQPSFQRRMLKGDQGQAGPAGPPGPPGAPGPRGPPGNTGKDGPRGPPGDQGAP
GQDGMEGPRGLPGKPGEVGEQGYLGPQGPPGSKGERGETGPQGDRGTDGLPGLKGDKGDV
GEQGPEGEIGRPGEKGTSASSDIIDFNGKLLDAFQAIKTISVSGPPGPPGPPGKEGPKGE
LGLPGPAGLDGEMGDKGETGERGVAGERGEKGEMGLSGPSGMDGQKGDKGDSILEDNLVQ
MISQPGPPGPPGSPGPPGYMGHRGMPGPKGDPGENVKGEKGEMGTLGIQGPQGPQGPPGA
TGLVGLPGTKGEKGKQGEPGLDGFPGIKGDRGVRAERGEKGDRGPVGKRGLKGKKGEQGP
PGLDQPCPVGSEGCKKEPVETGQLVSEDPCPLGPDGLPIPGCWHKDQGMLQKLKRKRLSQ
P
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcaacacagatatcaggtcctcctgggaaacgtggaagaagaggtgaccctgggtcca
ctcggtctggatggcaaacctggtcctcctggacctaaaggaagccaggggctgccggga
ccgaaaggagataagggtgaccagggagacactgggccaaggatggtcttcccccgctac
gatcacggttacatctcagccgatcagcccagtttccagcggcgtatgctgaagggtgat
caaggacaggccgggccagctggacctccaggccctcctggagcacctggaccaagaggc
cccccagggaacactgggaaggatggcccgcgtggcccaccgggagatcaaggtgcccct
ggacaagatggaatggaggggccgagaggtttaccaggaaaaccaggtgaagttggcgaa
caaggttacctaggaccacagggacccccggggtcaaagggtgagcggggagagacaggt
cctcagggtgacagagggacagacggtctgccaggtttaaagggagataagggagatgtt
ggagaacaaggacccgagggtgaaataggtcgtcctggtgagaagggcacatcagcatcc
agtgacatcatcgacttcaatggcaaactcttagatgcttttcaggccattaaaaccatc
agtgtctcgggaccacctggccccccgggaccaccaggaaaagaagggccaaagggtgag
cttggtttgcctgggcctgctgggcttgatggtgaaatgggagataaaggagagaccgga
gagcgcggtgtagctggagagaggggagagaaaggagaaatgggtctttctggtccttct
ggaatggacgggcagaaaggagataaaggagattctatactagaggacaacctggttcag
atgatttcacaaccaggaccaccaggacctcctggatcaccaggacctccaggatacatg
ggtcatcgtggcatgccaggccccaaaggtgatccgggggaaaatgttaaaggagaaaag
ggagagatgggcactctaggaattcaaggcccccagggtcctcagggtcctccaggggca
acaggattggttggcttgcctggcaccaaaggtgaaaagggaaaacagggggaacctgga
ttagatggttttcctggcattaaaggagacaggggcgtgcgtgcggagagaggagaaaag
ggggatcgtggtcccgttggaaagaggggcctcaaaggaaagaagggagaacagggacct
ccaggtctggaccagccctgtcctgtgggatctgaaggatgtaaaaaagagccagtggaa
acagggcagctggtctcagaggacccctgtccactgggtccagatggacttccaatacca
ggctgttggcacaaggatcaggggatgcttcagaaactcaagagaaagcgtctctcccag
ccgtga
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