Triplophysa rosa: 130563656
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Entry
130563656 CDS
T09216
Symbol
vps52
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 52 homolog
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130563656 (vps52)
Membrane trafficking [BR:
tros04131
]
Protein recycling
Others
EARP complex
130563656 (vps52)
Endosome - Golgi transport
Tethering complex
GARP complex
130563656 (vps52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
CoV_NSP7
MscS_porin
DUF4795
DUF5740
DUF7491
Motif
Other DBs
NCBI-GeneID:
130563656
NCBI-ProteinID:
XP_057205335
LinkDB
All DBs
Position
LG13:5961709..6001725
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AA seq
715 aa
AA seq
DB search
MAEAVTEGGAASVDSVSGAMAYLQNGKSADPLNLGDLDLTTDEFILDEVDIHIQANLEDD
LVKEALKTGVDLRQYSKQVETELQRIEQASIKDYIKESQNIASLHNQITACDSILERMEG
MLSSFQSDLSSISSEIQTLQQQSVSMNMRLKNRQAVRSQLSQLVDELVVPSTMISVILDS
PVTEQEFLEQLHELNNKINFAKELSFRETLACSDIQDIVDRLKIKAVSKIREFILQKIYS
FRKPMTNYQIPQNTLLKYRFFYQFLLANERTVAKEIRDEYVDTMSKIYFSYFKSYSGRLL
KVQYEDVADKDDLMGVEDTAKKGFFSKPSLKSRNTIFTLGQXEAVLSPVELEGPILIPHA
AQRGDCRYPYETLFRSQHYALLDNGCREFLFLSDFFMVAGNSALDLFNSIMGKTLSMFLK
NLATYLSDCYDSIAVFLCIHIILRFRAVTAKRNVPALDKYWEAVLELLWPRFELILEMNI
QSIRNTDPQKLGVLDTRPHYITRRYAEFSSAIVSINQTFPNERTNTLLGQLQIEVENFVL
KMAAEFPSRRDQLIFLINNYDMMLSVLMERAADDSKEVEGFQQLLLARTQEFIEEILSPP
FGGMIAFVKESEALMEKGQLDKLKNDEARITQLVRGFSNTWKQSVEVMSQDVMRSFTNFK
NGTSIIQGALTQLIQYYHGFHKVLSQQTFRSVAARSELINLHHLMVEVKKHKPNF
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagcagtgactgaaggtggtgctgcttctgttgattccgtgtctggtgcgatg
gcttatttacagaatgggaaatcagctgatcctctgaatctgggtgatctggatctcaca
acagatgagttcattctggatgaggtggacattcacattcaagcaaatcttgaggatgat
ctggtgaaggaggctctgaagacgggtgttgacctgcgacagtactcgaaacaggtggag
acagaacttcagcggattgaacaagcgtcgatcaaagactatattaaagagagtcagaac
attgcctctttacacaaccagatcacagcttgtgactcaatcctagagcgaatggagggc
atgttgagcagttttcagagcgacctgtcgtccatcagcagtgagattcagacactacaa
cagcagtccgtcagtatgaacatgagactgaagaacagacaggctgtccgcagtcagctc
agccagctggtggatgaactggtcgttcccagcacaatgatatctgtgattttggacagt
cccgtcacggagcaagagtttctggagcaacttcatgagctcaataacaagatcaacttt
gctaaagagctcagcttcagagagactctcgcctgctcagacatacaagacatagtagat
cgtctcaaaatcaaagctgtctcaaaaatccgtgagttcattctgcagaaaatctactca
ttcaggaagcccatgaccaactatcagatccctcagaacaccttactcaagtacaggttc
ttctatcagtttctgttggctaatgagaggacagttgctaaggagattcgggatgagtat
gtggacaccatgagcaagatctacttcagttacttcaaatcatacagcggtagactgctg
aaagttcagtatgaagatgtagcagacaaagatgatctgatgggggtggaggacacagcc
aaaaaaggtttcttctccaagccatctttgaagagcaggaacactatctttactctgggt
cagtgagaggctgttttgagtcctgtggagctggaagggccgatactgatcccgcacgcc
gctcagagaggagactgcaggtatccgtatgaaactctcttccgcagtcagcattacgct
ctactggacaacggctgtcgggagttcctcttcctgtcagacttctttatggtggcggga
aactctgcgctggatctgttcaacagcatcatggggaaaacgctcagcatgtttctgaag
aatctggcgacgtacctgtcggattgttatgacagcattgcggtgtttctctgcattcac
atcatcctgcgcttcagagccgtcacggccaagagaaacgttcctgcgctcgacaagtac
tgggaggccgtgctggaattgttgtggccgaggtttgagctcattctggagatgaacatt
cagagcattcgaaacactgatcctcagaaactgggagtactggacaccagaccgcactac
atcacgcggcgctacgctgagttctcttctgctattgtcagcatcaatcaaacgtttcct
aatgaaaggaccaacactctcctcggccagctgcagatcgaagtggagaactttgtgcta
aagatggcggctgaatttccatccagacgagaccagctgatctttctcatcaacaactat
gacatgatgctcagcgtcctcatggagagagccgctgatgacagtaaagaagtggaggga
tttcagcagctgctgctggccagaacacaggagtttattgaggagattctgtcgcctccg
tttggaggaatgattgcatttgtgaaggagagcgaggcactcatggagaaagggcaactg
gacaaattaaagaatgatgaagctcgtatcactcagttggttcggggattttcaaacaca
tggaagcagtctgtggaggtgatgagtcaggatgtcatgcgttcctttaccaactttaaa
aatggaaccagcatcattcagggggcgctgacccagctgattcagtattatcatggtttc
cataaggtcctctcccagcagacgtttcgcagtgtggcagctcgctcggagctcatcaac
cttcatcatctgatggtggaggtgaagaaacacaaaccaaacttctga
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