Triplophysa rosa: 130563746
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Entry
130563746 CDS
T09216
Symbol
ebf1a
Name
(RefSeq) transcription factor COE1-A isoform X1
KO
K09103
early B-cell factor
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tros03000
]
130563746 (ebf1a)
Transcription factors [BR:
tros03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
130563746 (ebf1a)
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GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
HLH
Motif
Other DBs
NCBI-GeneID:
130563746
NCBI-ProteinID:
XP_057205484
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Position
LG13:13549492..13676015
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AA seq
604 aa
AA seq
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MFGIQDSIQRSGSSMKEEPIGAGMNAVRTWMQGAGVLDANTAAQSGVGLARAHFEKQPPS
NLRKSNFFHFVLALYDRQGQPVEIERTSFIGFVEKEKETTGEKTNNGIHYRLQLLYSNGI
RTEQDFYVRLIDSMTKQAIIYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDP
VIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTTVSVDGHVLAVSDNMFVHNNSKH
GRRARRLDPSEGTQSYLEHATPCIKAISPSEGWTTGGATVIIIGDNFFDGLQVIFGTMLV
WSELITPHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGTPGRFIYTALNEPTIDYGFQRLQ
KVIPRHPGDPERLPKEVILKRAADLVEALYGMPHNNQEIILKRAADIAEALYNVPRSHNQ
LPGLANNSVHTGMMGVNSFHSQLAVNVSESTQAANQGFSRNTSSVSPHGYVPSSTPQQSS
YSTVSTSMNGYGNTGMNTLGGSPNFLNGSAANSPYAIVPSSPTMASSTSLPSNCSSSSGI
FSFSPANMVSAVKQKSAFAPVVRPQTSPPPTCTSANGNGLQVDQSFVDSSKYSTASSLQG
LAFS
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgttcgggattcaagacagcattcaaaggagcgggagtagtatgaaagaggagcccatc
ggagccgggatgaacgccgtccggacatggatgcagggtgccggagtgttggatgcgaac
acagccgctcagagtggagtgggtcttgctcgagcacactttgagaaacagcccccatca
aatcttcgcaaatccaacttcttccacttcgttttagctctctacgacagacaaggacaa
cctgtggaaattgaaagaacttcttttattggatttgtcgaaaaggaaaaggaaactacc
ggggaaaagacaaacaatgggatccattacagattgcagcttctttatagcaacggcatc
agaacagaacaggatttttatgtacgcctgattgactccatgacaaagcaggctattatc
tatgaaggtcaagacaagaacccagagatgtgccgggtgttgctgacgcacgagatcatg
tgcagccgctgctgtgacaagaagagttgtggcaaccgtaacgagacgccctctgacccg
gtcatcattgacaggtttttcctgaaattcttcttgaaatgcaaccagaactgcctaaag
aatgcagggaacccacgagacatgcggcgctttcaggtggtggtgtctacgacggtcagc
gtggacggtcatgtgctggcagtgtcagataacatgtttgtacacaataactctaaacat
ggacgcagagctcgtaggctggatccctctgagggcactcagtcatacctagaacacgcc
actccctgcattaaggccattagtcccagtgaaggctggacaactggtggtgccacagtc
atcatcataggagataacttcttcgacggcctacaggtcatctttggcacaatgctggtc
tggagtgagcttataacccctcacgccattcgagttcagactcctcccagacacattcct
ggggtcgtggaggtcactctgtcctacaagtcaaaacagttctgcaaaggtacaccgggc
agattcatctacacagcactgaatgagcccactattgactacggtttccagcggctacag
aaggtcattccccgacacccaggcgaccctgagcgcttaccaaaggaggtgattctgaag
agggcagcagaccttgttgaagctttatatgggatgccacacaataatcaggagatcatt
ctgaaaagagcagccgatatcgcagaagcgctctacaacgtcccacggagtcacaaccag
ctgccgggtttagccaacaactcagtgcacacgggcatgatgggagtgaactctttccac
agccagctcgcagtcaatgtgtccgagtccacacaagcagccaatcagggtttcagtcga
aacacgagcagtgtttctcctcacggttatgtgcccagctcaacaccccaacagagcagc
tacagtaccgtctccaccagtatgaatggatacggtaacacaggcatgaacacgttggga
ggatcaccaaacttcctcaacggctctgctgctaactctccttatgccatcgttccttcc
agtcccactatggcctcctccaccagtcttccctccaactgcagcagctcctcgggcatc
ttctctttctccccggccaacatggtgtccgcagttaaacagaaaagcgcttttgctccc
gtcgtacggccccagacctcaccgccccctacctgcaccagtgccaatggaaatggcctc
caagtagatcaatcctttgtggactctagcaagtactccaccgccagctccctgcaggga
ctggccttttcctga
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