Triplophysa rosa: 130563813
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Entry
130563813 CDS
T09216
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tros04121
]
130563813 (rlim)
Enzymes [BR:
tros01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130563813 (rlim)
Ubiquitin system [BR:
tros04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130563813 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
SPT6_acidic
Prok-RING_4
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
130563813
NCBI-ProteinID:
XP_057205577
LinkDB
All DBs
Position
LG13:1110805..1116036
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AA seq
660 aa
AA seq
DB search
MEGQDNAEQGGSDQSEMQRRRQLDRLDREEAFYQFVNNLSEEDYRLMRDNNLLGTPGEIT
ADELLSRLRQIKHGPEPPGNENTEERREEPAVTESEGTEENPSGETLLDWLNTVRQTGNT
TRSGYRGNQSWRAVSQTNPNSGDFRFSLEINVNRNLAEQQTQTERSEGSQERPDGPVSEP
ESLMETAEVVEEPVVDEVAVIVEPDLSLNREVSPPSAPSPPSPPSPPSPPSAPSAPSAPS
PPSPPSPPSAPSAPSPPSPPSLASVEQPRRGQVRARSRSPEQRRTRARTARGRSPLNLER
LDGLSPAQHGLPPRTSESLPEPQVEGSSRTRQLFLSRQSTAEVDAQESGAAPEAPQERET
PAGEAGASGRRPPTIMLDLQVRRVRPGEYRQRDSIANRTRSRSQTSNNTLLYETERGGFR
RTFSRSERAGVRTYVSTIRIPIRRISDAGLGEATSLALQSMIRQIMTGFGELSYFMDSDY
PDSNREESDSPPADIADALSNPDVSTGTADSFVSGSGGSNQSDLEARTEEREVEGGVPSA
ASPRESRARPRAPISLDETGSLPFLRLAHFFLLNEDDDDQPRGLTKEQIDNLSMRNFGES
DALKTCSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSANRESVV
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggagggtcaggataatgcagaacaaggtggcagcgatcagtcagaaatgcagcgcaga
agacagctggaccgtcttgaccgagaagaagccttctaccagtttgtcaacaatctcagc
gaggaagactataggctcatgagagacaacaatctgcttggcacccccggtgaaataact
gcagatgaactgttgagtcgtcttcgtcaaatcaagcatggccccgagccgcccggcaat
gaaaacacagaggaaagaagggaagagcctgctgtgacagagtctgagggcaccgaggaa
aaccccagtggggagacccttcttgactggctcaacacagttcgacagacgggtaataca
accagaagcggttaccggggtaaccagtcatggcgggctgtgagccagaccaatcccaac
agtggagatttccgcttcagtttggaaatcaatgtcaatcgaaacttagccgagcagcaa
acgcagacagagagatcggaaggcagccaggaaagaccagatggacccgtgtctgagcca
gagagtcttatggagacagcagaggtggttgaagagccagtggtggatgaggtggctgtg
atagtcgagccagatttgtctctaaacagagaagttagcccaccaagcgcaccaagccca
ccaagcccaccaagcccaccaagcccaccaagcgcaccaagcgcaccaagcgcaccaagc
ccaccaagcccaccaagcccaccaagcgcaccaagcgcaccaagcccaccaagtccacca
tccttggcatcagtggagcaaccacgtagaggtcaagtaagggctcgcagcagaagccca
gagcaacgacggacgagggctcgtaccgcaagaggtcggtcgcctctcaaccttgaaaga
ttagatggactttctcccgctcagcatggcctacctcctcgcacttccgagagccttccc
gagccccaggtggagggtagctcaaggactcgtcagctgtttttgtctaggcagagcacg
gcggaagtggacgctcaagaatcgggagcagcccccgaggcaccgcaggaaagagagacg
ccagctggagaagcgggagcttcagggcgacgtccaccaactataatgctggacttgcaa
gtacgtagagtacgtcccggagagtatcgccagcgggacagcatcgctaaccgcacaagg
tctcgttcgcagacctccaacaacactttattatacgagaccgagcgcggtggtttccgc
cggactttttcgcgttccgaacgggctggagtgagaacgtatgtcagcaccatccgcatt
cccattcggaggatttcggatgccggactgggggaagccacttccttggctctgcagtcc
atgattcggcagatcatgactggcttcggtgagctcagctactttatggactcggactat
cctgactccaaccgtgaggagtcagacagcccgccggcggacatcgccgacgcgctgagt
aaccctgatgtgtctactggaaccgcggattccttcgtttctgggtccggaggctccaac
cagagcgatttagaggcacggacagaagagagggaggtggaaggtggagttcccagcgct
gcgtctcctcgcgagagccgggccagacctcgagctcccattagcctggatgagaccggc
tctctgccttttctgcgactcgcgcacttcttcttactcaacgaggatgacgacgatcag
ccacgaggcctcaccaaagagcagatcgacaacctgtccatgcgaaactttggcgagagt
gatgcgcttaaaacctgcagcgtctgcatcacggaatacgccgaaggcaacaagttgcgg
aagttaccctgttctcacgaataccacgtgcactgtatcgaccgctggctttccgagaac
tccacctgcccgatctgtcgccgggcggttctcgtttccgccaaccgcgagagtgtcgtc
tag
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integrated database retrieval system
