Triplophysa rosa: 130563823
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Entry
130563823 CDS
T09216
Symbol
rnf130
Name
(RefSeq) E3 ubiquitin-protein ligase RNF130 isoform X1
KO
K15701
E3 ubiquitin-protein ligase RNF130 [EC:
2.3.2.27
]
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tros04121
]
130563823 (rnf130)
Enzymes [BR:
tros01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130563823 (rnf130)
Ubiquitin system [BR:
tros04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130563823 (rnf130)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
PspB
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
130563823
NCBI-ProteinID:
XP_057205590
LinkDB
All DBs
Position
LG13:complement(14309817..14359130)
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AA seq
428 aa
AA seq
DB search
MLKRLAAPASCSSCLLAFFLAFVSPRCTLSIGADKNMVNKEDYYSATVNATVLDHKGNPQ
QMVTKNDGRYGQNSPKTEAKGIVIAPAAVNGAVDLQGCCPYTRFVVPPKTTHWVAIMQRG
KCTFKEKILKAAAFNASAVIIYNNGSKEDTVTMAHEGTGDIVAVMITESFGKEILGFLEK
NQTVLVSVMVGSRGPPKNINRGSLVFVSISFIVLMIISSAWLIFYFIQKIRDTSARDRSQ
RRLGDAAKKAISKLTTRTVKRGDKETEPDFNHCAVCIEGYHLNDVVRILPCKHVFHKMCV
DPWLNEHCTCPMCKLNILKALGVMPNLPCVDNMGFDMERMSRSQTSSQRTALMDLSSETS
ISLEPLRHSSSSQHPSDDELMSRTGEINIAVTKEWFIVASFAVLSALTLCYMIIRATTST
PTYEVMLE
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagagactggccgcaccggcgtcatgcagcagctgtctccttgccttcttcctc
gccttcgtctcgcccaggtgtacgctgtctatcggtgccgacaaaaatatggtcaacaag
gaggattattatagcgccacggtgaacgccaccgttttggaccataaaggcaatcctcaa
cagatggtaacgaagaatgatgggcgttacgggcagaattcacccaaaacagaggcgaag
gggattgtgatagcacctgctgctgtcaatggggctgtcgatctgcaaggctgctgtcca
tacacgcggtttgtagtgcctccgaaaaccacacactgggtggccataatgcagagagga
aagtgcaccttcaaggaaaagatcctgaaggcggccgcattcaacgcctcagcagtcatt
atctacaataacggctccaaagaggacacggtcaccatggctcatgaaggcaccggggac
attgtggcggtcatgatcactgagtcttttggaaaggagattctgggcttcctggagaag
aaccagacagtgctggtgtcagtgatggtggggtcacgagggccacccaagaacatcaat
cgcggatccttggtgtttgtctccatctccttcatcgtactgatgattatctcctccgct
tggctcatcttttacttcatccagaagatcagagacaccagcgctcgagaccgcagtcag
cgacggctgggagatgctgccaaaaaggccattagcaagctgactaccaggacagtaaaa
agaggggacaaggaaacggaaccagattttaatcattgtgcagtatgcattgaaggttac
catctaaatgatgtggtccgcatcttgccttgcaagcacgtcttccataaaatgtgtgtg
gatccatggctaaatgagcactgcacctgccctatgtgtaaactcaacatacttaaagca
ctgggagttatgccgaacctgccctgtgtggacaacatgggttttgacatggagcggatg
tcccgcagccagacgtccagccagagaacggcactgatggacctgtcctctgagaccagc
atcagtctggagcctctgcggcattccagttcatcccagcacccctccgacgatgagctc
atgtctcgaaccggagagattaacatcgctgttaccaaagagtggtttattgttgccagc
ttcgccgtcctctctgctctcacactttgttacatgatcatcagagccaccaccagcacc
cccacctatgaagtgatgttggaatga
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