KEGG   Triplophysa rosa: 130563847
Entry
130563847         CDS       T09216                                 
Symbol
smu1a
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
tros  Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:tros00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tros03041]
    130563847 (smu1a)
Spliceosome [BR:tros03041]
 Complex B
  Other components
   Complex B specific factors
    130563847 (smu1a)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_CDC20-Fz WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_WDR90_POC16_2nd NBCH_WD40 LisH_TPL Beta-prop_Nup120_160 Ge1_WD40 Beta-prop_RIG_2nd Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_NWD2_C WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214 Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_BBS7 Beta-prop_DCAF12 Beta-prop_VPS8 DUF7165 Beta-prop_IP5PC_F Beta-prop_WDR75_2nd Beta-prop_NOL10_N LisH VPS8_N zf_topless TolB_like LisH_PAC1
Other DBs
NCBI-GeneID: 130563847
NCBI-ProteinID: XP_057205615
LinkDB
Position
LG13:20887966..20891415
AA seq 513 aa
MSIEIESADVIRLIMQYLKENNLQKTLVTLQEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLIDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL
LARSYFDPREAYPDGSSKEKRRAAIAQALAGEVSVVPPSRLMALLGQSLKWQQHQGLLPP
GMTIDLFRGKAAVKDVEDERFPTQLCRHIKFGQKSHVECSRFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMSFSRDTEMLATGAQDGKMKVWKIQSGQCLR
RYERAHSKGVTCLSFSKDSTQILSASFDQTIRIHGLKSGKCLKEFRGHSSFVNEATLTPD
GHHVISASSDGTVKIWNVKTTECTSTFKSLGTSAGTDITVNNVILLPKNPEHFVVCNRSN
TMVIMNMQGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDFVLYCFSTATGKLERTL
TVHEKDVIGIAHHPHQNLIATYSEDGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctatcgaaatagagtcagcggacgtgatccgtctgatcatgcagtacctgaaggaa
aataacttgcaaaagactttggtgacactacaggaggagaccacagtgtccttgaacact
gtggacagtattgagagttttgtagctgatatcaatagtggtcattgggatactgtcctt
caggctatacagtctctcaaactccctgacaagaccctgatcgacctttatgaacaggtt
gttctcgagctgattgaactccgagagttgggagctgccagatccttgttgaggcagacg
gaccccatgatcatgctgaaacaaacccagcctgagcgatacatccacctggagaatctt
ctggctcgctcgtattttgacccgagagaggcttatcctgatggcagcagtaaagagaag
cgtagagctgccattgctcaggctctggcaggtgaggtcagtgtggtaccaccctcacgt
ctgatggctctgctcggacagtctctgaagtggcagcagcaccagggtctcctgcctccc
ggtatgaccattgatttgttccgaggtaaagcagccgtgaaagatgtcgaggacgagcgt
ttccccacacagctgtgcagacacatcaagtttggtcagaagtctcacgtggagtgctca
cgcttttctcctgacggtcagtatctggtcactggatctgtggatggattcattgaggtg
tggaatttcaccactggaaaaatccgaaaggatctgaagtaccaggcacaagataacttc
atgatgatggatgacgctgtgctctgcatgtccttcagtcgagacactgagatgttggcc
acaggagctcaggacggaaaaatgaaggtgtggaagatccaaagtggccagtgtctgcgg
cgctatgagcgtgctcacagtaaaggtgtcacctgtctcagcttcagtaaagacagcaca
cagatactctctgcctcctttgaccagaccatcaggattcatgggctgaaatcaggcaag
tgtttgaaagagttcagaggtcattcttcatttgtgaatgaagccacgttaactcctgac
ggacatcatgtgatcagcgcctcctctgacggaactgtgaagatctggaacgtaaagacc
acagaatgcaccagcacgttcaagtctctgggtacttctgctggaacagacatcacggtc
aacaacgtcatcctgctccctaaaaaccctgaacatttcgtagtttgtaaccgctctaac
actatggtcatcatgaacatgcagggccagattgtgagaagtttcagctctggtaaaaga
gaaggaggtgatttcgtgtgctgtactctgtccccgcgtggcgagtggatctactgtgta
ggagaggactttgtgttatattgtttcagcacagccacaggaaaactagagagaaccttg
accgttcatgagaaggatgtcatcggtattgcacaccacccacatcagaatttaattgcc
acatacagtgaggatggactgcttaaactctggaagccataa

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