Triplophysa rosa: 130563953
Help
Entry
130563953 CDS
T09216
Symbol
frmpd1b
Name
(RefSeq) FERM and PDZ domain-containing protein 1
KO
K23954
FERM and PDZ domain-containing protein 1
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tros04990
]
130563953 (frmpd1b)
Domain-containing proteins not elsewhere classified [BR:
tros04990
]
Other domain-containing proteins
FERM domain-containing proteins
130563953 (frmpd1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FERM_M
PDZ
RA_2
PDZ_6
PDZ_2
FERM_C_FAK1
FERM_f0
T15H9-4_C
Motif
Other DBs
NCBI-GeneID:
130563953
NCBI-ProteinID:
XP_057205765
LinkDB
All DBs
Position
LG13:23995033..24024238
Genome browser
AA seq
1609 aa
AA seq
DB search
MEEKERSRSRSPRRVRRVEQVVGKWLRRSRDSLSRERILGGRRFRSGESGQQNFPVKVTV
EVIRDAVLDSHGFTLSTQHPLLVRDVTAGGPADGQLLPGDQILKVNNRAVEDLSPENAEK
MIRECRDSVTMTILRNMVNPKSSFITAEKRARLRRNPVKVRFAEEVVVNGHTQGNSLLFL
PNVLKVYLENGQTKAFKFHKSTTVKDIVLTLREKLSIRAIEHFSLVLEQQYNTNKLLLLH
EDELIQKVVQKKDSHDYRCLFRACFIPRDPIDLLQDDPVAFEYLFQQSVGDVLQERYAVE
MKCNTALRLAALHMHEKMASCGQTTRASVKSIVKEFGLESFISPTLLRNMRDKDLRKAIN
HHMKKIQSLLEPRQKVISVSQARLAYLTQMAELMSYSGRTYNATMLLQDRESLVTLLVGS
RYGISQILNHQLNMISTIIDFHYITRIEVLSETDRISMVKIYLQDIQPLALLMESVGAKD
LACLLAGYCKLMVDPTINVFRWGPRPKMRRIPAEGYISRCGSDSQDSSEDDYVMEGLLDA
QLSEDTMSNQTNDGTEEGDEDEADRRTEAERLRVIVTHPCLEDEGEEEAGKSESVADEDY
SVTMGWYTDPRVNSSFSSLSSNSLNALEESIKVAIGGLDCEDAPQEEKFSSGTSDLDVHH
PYLLEVPERMNQRGNLNKPRRPSQLTYNDRSGLRFVDLSQMSDSLPSPPTASDDALSDED
DEEGEQDNDVSSMSAEFEAVLASCSAYSINAKLAGVNFQELFSRIHRQERGSNNQTDPKQ
QRRSKTTARAATMRSDTSNVKDSESEEEFFDAQDRFTPPVAEKRTTEKYLGNKQDVVSDF
KAHMEKNKHQESTASNEEERRAELISQTNKQNNNEKPSLVNHIAPESANTEVEIHQPSLI
LPPESTPVEPLTANVSSGQKAQHCNGDIPGRNAHLSSQLLEMEPDTMEFKPVTGPGPVMS
SSRITAIRQATLPPQNPETLQNGPKPQNGISDHASVCLEKTPNHVRGLDTQDIEPIEKEP
KTNTGNITGDNKNYLQQTVESRKPEPQLNTKPPIPPKPSSIILQSTPLNAPSQKPEAKQN
VPPNGLSLHPWSQRNGTSPPATLSKGVSQSHENLRTELKTESSSMKASSASNTPSPSPLA
SPSVQSVSIIPEDPNPNLPNRTGSSARLSATALRGRIQDMPWYLTRSQEILGTVALSNTI
SSTGINGTHSTDVNHESKKVSPKATSVSSLIEWKEKDAEVVIVKLKDGPEEATPIPAPAS
SSQPDLRQQLSVEELNKHFGTCKSEQPQSQKENPVVMRLDNASSLSSSSPSHRDACGCHT
VYANCFSGHTEDICGFDDNLTVYEFSRRNQISKPPQPTPVPPSTLSAPSPNVLSLLRDSP
RPLSMSSELSPLLIPPRPLESLCLDHRSVDNPFRFLQGHRYVSSQKGAGLKESYASLLRD
IDELLLVLKRGPSSVYPPTRKGECENGNGVIEQTISETERCLVQAEARRLASGCQKATRV
GWAPDDALLSLGNSFGALVQLASTCMRVPCSDCGGCHGDIDADEALGKLEEIVDLYKEFV
AAVQTAREGEGVRLLAKQCTVLISTVFTLTQLFRTRTPDIDNGNVPLNF
NT seq
4830 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaaagagaggagcaggagtagatctccgcggagggtccgtcgggtggagcag
gtggtgggcaaatggctgcgtcgctctcgagactctctcagcagagagcggattctggga
ggcaggaggtttcgctccggggagtcgggtcagcagaacttccctgtgaaggtgacagtg
gaggtgatcagagatgctgtgctggactctcatggatttactctctcaacacaacacccc
ctgctggtcagggacgtcactgcaggaggtcccgctgacggtcagctcttacctggagat
cagatcctgaaagtcaacaacagagccgtagaagatctttctccagaaaatgctgagaag
atgattcgggaatgccgggactctgtaaccatgacgatcctcagaaacatggtgaatcca
aagtcatcgttcatcacggcggagaagagagctcgactgagaagaaacccggtgaaagtg
cgctttgcagaagaggttgttgtgaacggtcacactcagggaaactctcttctctttctg
cctaatgttctgaaggtttacctggagaacggccagaccaaagccttcaaatttcacaag
agcaccactgtcaaggacattgtgttgactctgagagagaagttgtccattcgtgccatt
gagcatttctcactggttctggaacagcagtataataccaataaactactgttactgcac
gaggacgagctcatacagaaggtggtgcagaagaaagactctcatgactacaggtgtttg
ttcagggcgtgttttatacccagagaccccatcgaccttctgcaggatgaccccgtggcc
tttgagtatctctttcaacagagtgttggagatgtgttacaggaacgatacgcagtggag
atgaaatgcaacacagcattgagactcgcggcgctgcacatgcatgaaaaaatggcgagc
tgtggacaaaccaccagagcatcagtcaagagtattgtgaaagagtttggtttggaaagt
ttcatctctcccaccctgttgagaaacatgagagataaagacctgcgcaaagccatcaac
catcacatgaagaagatccagtcactgctggaaccacgacagaaggtgatttctgtgtct
caggctcggttggcttatctgacccagatggctgagttgatgtcatacagcgggagaacc
tacaacgccaccatgctgctgcaggacagagaatcattggtgactttgctggtgggatcg
agatacggcatcagtcaaatactgaaccaccagctcaacatgatctccaccatcatagac
ttccattacatcactcgaatagaggtgctgtcagagaccgacagaatcagcatggtcaag
atctacctgcaggacattcagcctttagctttactcatggaatcagtgggagctaaagat
ttggcctgtctgctggctggatactgcaaactcatggtggaccccacgataaatgtgttt
cgctggggacccagacctaaaatgagacgcattcctgcagaagggtacatttctcggtgt
ggcagcgattcacaagacagttcagaagatgattatgtcatggaaggcctgctggacgct
cagctgtcagaagacaccatgtccaatcaaacgaatgacggcacagaggaaggtgacgaa
gacgaggcggacaggaggactgaagcagagaggctgagagtgatcgtaacacatccgtgt
ttggaggacgaaggagaggaggaggccggaaagagcgagtccgttgcggacgaggattac
tcggttaccatgggttggtacacggaccctcgagtcaacagcagcttctccagtttatcc
agtaactcactgaacgcactggaggagagcatcaaagtggccatcggtggactggactgt
gaggatgctcctcaagaggagaagttcagttccggcacgtcagatctggacgttcatcat
ccgtacctgctggaggtgccggagcgtatgaatcagagggggaatttaaacaaacccaga
cgaccttctcaactgacctacaatgatcgatcgggtctgcgcttcgttgacctctcgcaa
atgtctgacagtttgccgagtcctcccacggccagcgatgatgcgttgagcgacgaagac
gatgaggagggagagcaggacaatgatgtttccagcatgtcggctgaattcgaggcggtg
ttggcctcctgtagcgcatacagcatcaatgctaaattggcaggtgtgaattttcaagaa
cttttctccaggattcacagacaagagagaggcagcaacaatcagactgatccgaaacaa
cagagacgctcaaagacaacagcacgagctgcgaccatgagatctgacacatcaaatgtt
aaagactcagaatcagaagaggaattctttgatgctcaagatcgatttactcctccggta
gcagagaaacgcactacagagaaatatttgggaaacaaacaagatgttgtcagtgatttc
aaagctcacatggagaagaataagcatcaagaatccacagcgagcaatgaagaggaaaga
agagcagagctcatctctcaaactaacaaacagaacaataatgagaaaccatctcttgtt
aatcacatcgctccggagtctgccaacactgaagtggagatccatcagccctcactgatt
ttacctcctgaatctacacctgttgaacctctaactgctaacgtctcgtcgggtcagaaa
gcccagcactgtaatggtgacatccctggccgaaacgctcatctgtcatcacagcttctg
gagatggagccggatactatggagttcaaaccagtcactggacctggaccagtgatgtcg
tcttcccgaatcacagcgatacgccaagctacccttcctccccagaacccagagactctt
cagaatggacccaaacctcaaaacggaatatctgatcatgcatcggtatgtttggagaag
actccaaatcacgtgcgaggacttgatactcaagacattgagccgattgaaaaagagcca
aaaaccaacacaggaaacataacaggagataacaagaattatctacagcagactgttgaa
agcagaaaaccagagcctcaactaaacacaaaacctccaatacctcccaaaccttcatcc
atcattttacagtcaacaccgcttaatgccccatcacaaaaacctgaagccaagcagaat
gttccccctaatggtctttccctacacccctggtctcagagaaatggtacctctccacct
gctacactgagtaagggtgtatctcaaagtcacgagaacctgaggactgaactcaagact
gaaagctcttcaatgaaagcgtcaagtgcatcaaacacaccgagtccttctcccttagct
tcaccttctgttcagtctgtcagtatcatacctgaagatccaaatcctaacctccccaac
agaacgggctcatccgcgcgtctctcagccacagccttgcgtgggagaattcaggatatg
ccgtggtacctcacccgttcccaagagattttgggcactgtagcactcagcaacactatt
tcatcgacaggaatcaacggcactcattcaacagacgtaaatcacgaatccaagaaagtt
tctcctaaagccacttcagtgtcgtctctgatcgaatggaaggagaaagatgctgaagtg
gtcattgtgaagctcaaagatggaccggaggaggccaccccgattcctgcaccagcatca
tccagccaacctgacctgagacagcaattatctgtagaagagttgaacaagcattttggg
acgtgcaagtctgaacagcctcagtcacagaaagaaaaccctgtagttatgagactggac
aatgcttcctctctgtcttcgtcgagtccttcccatcgggatgcctgcggctgccatacg
gtgtacgccaactgtttcagtgggcatacggaggacatctgcggctttgatgacaatctg
accgtgtacgagttctcccgtcggaaccagatcagtaaacctcctcaacccacaccggtt
ccaccgtccaccctttctgccccttctccaaatgttctgtcccttttgagagactcaccg
cgtcccctctccatgtcctctgagctcagtccactcctgatcccacccagaccgctggaa
tcgttgtgtctggaccacagatctgtagacaatcccttccgcttcttacagggccatcgc
tacgtgagcagccagaagggtgctgggctcaaagagagttacgcttctctgctgcgagac
attgatgaactgcttttagtgttgaagagaggaccatcctcggtgtacccccccactcgc
aagggagagtgtgaaaacggcaacggtgtgatcgagcagacaatttcggagacggagaga
tgcctggttcaggccgaggcgcggaggttggcgtcgggatgccagaaggccacaagggtg
ggttgggcacctgacgacgctcttctgtcgctcggtaacagcttcggcgcgctggtgcaa
ctagcctccacctgcatgcgagtgccctgctcggactgtggaggttgtcatggcgacatt
gacgcggatgaagccttggggaagcttgaggagatcgtggacctgtacaaagagttcgtg
gccgccgtacaaacagcgagagaaggcgaaggcgtcaggctgttggccaagcagtgtacg
gttctcatctctacagtcttcactctcacgcagctgtttaggacacggacgccagacata
gacaacggaaacgtacctctgaacttttaa
DBGET
integrated database retrieval system
