Triplophysa rosa: 130564142
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Entry
130564142 CDS
T09216
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
tros
Triplophysa rosa
Pathway
tros04120
Ubiquitin mediated proteolysis
tros04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130564142 (syvn1)
04120 Ubiquitin mediated proteolysis
130564142 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tros04121
]
130564142 (syvn1)
Enzymes [BR:
tros01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130564142 (syvn1)
Ubiquitin system [BR:
tros04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130564142 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_5
zf-RING_11
zf-RING-like
zf-ANAPC11
FANCL_C
zf-Nse
Motif
Other DBs
NCBI-GeneID:
130564142
NCBI-ProteinID:
XP_057206028
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All DBs
Position
LG13:complement(8906446..8912173)
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AA seq
613 aa
AA seq
DB search
MVRAALVTTTSLALTGAVIAHAYFLKNQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKL
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWVFHFRVLSLVVLLGVLDFMFVNHACHSIITRGASVQLVFGFEYAI
LMTMVLTTFIKYTLHTVDLQSENPWDNKAVYMLYTELFTGFIKVILYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQAADNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASQPNQTPPPAPAQAPAPAAPAPVP
PPVNVAPGMMPQFPPGMFPFWGPFPGAPPPAPPGAQAATDPPQPSANEAQTQGAGASSST
QPPADSASPAPGAMPGFPFSMPPPFPSAPWLPMPPPPPFMSSMPPPPSSLSTMSEAELRE
LEQEGRQGLEARLQCLHNIHTLLDAAMLNIHHYLSTVATLSPPRSEINTGETNAAANEES
SPSTDNSEIPSQENETQSTGSVNGATGFSQPDSTTEADKEKEGKCDEDDGEPSAAELRRR
RLRKLETAQTPDH
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagcagcactcgtgacgaccaccagtttggctttgactggcgcagtaattgcc
catgcctacttcctcaagaaccagttctacccgactgtggtataccttaccaaaagcagc
cctagtatggcagttttatacattcaggctttcgtgttggtattcctactgggaaaatta
atgcggaaggtctttttcggccagctgagagctgctgaaatggagcacctgatcgagcgc
tcctggtacgctgtaacggagacatgtttagccttcacggtgttcagggatgatttctct
cctcgcttcgtggccctgttcactttgctgctgttcctcaagtgcttccactggctggct
gaagacagggtggactttatggaaaggagtccaaatatttcctgggtcttccacttccga
gttctctctttggtggtgttgctgggagttttagactttatgtttgtcaatcacgcgtgc
catagcatcatcaccagaggagcatcagtgcagctggtgttcggatttgagtatgcgata
ctgatgactatggttctcaccaccttcatcaaatacactttacatacagttgacctccaa
agtgaaaacccatgggacaataaggctgtctacatgctgtacacagagctctttaccggt
tttatcaaggtgattttgtatatggcattcatgaccataatgataaaagtgcacacattt
cctctgtttgccattcggcccatgtatctcgcgatgaggcaattcaagaaggctgtaaca
gacgccatcatgtctcgacgagccatccgtaatatgaacactctctatcccgatgccacc
cctgaagacttgcaggccgccgacaatgtgtgcatcatctgccgtgaagagatggtgact
ggagctaagaaacttccctgcaaccacatctttcactcaagttgccttcgctcgtggttc
cagagacagcagacgtgtccaacctgccgtatggatgttcttcgagcatcccagccaaac
cagactcctcctccagctcctgcgcaggcacccgcccctgctgctcctgcccctgtccct
ccacctgtcaatgttgccccaggtatgatgcctcagtttcctccgggaatgttcccattt
tggggtcctttccctggtgcacctccacctgctccccctggtgctcaggcagccactgac
cctccacagcccagcgcaaatgaagcgcagacgcaaggagcaggagccagcagctctacc
cagcctcctgcagacagcgcctcacccgctccgggagccatgcctggattcccattttca
atgccaccacctttcccatcagccccatggctgccgatgcctcctcctccacccttcatg
tcatccatgccacctccaccatcatctctgtccaccatgtcagaagctgagctcagagaa
ctggagcaggagggcaggcaaggtttagaagccagactgcagtgccttcacaacatccac
acattgctggatgctgctatgctcaacattcaccactacctcagcacggtggctacatta
agtcctcctagatcagaaattaacacaggtgagacaaatgcagcagcgaatgaggagtcc
tctccctccaccgacaactcggaaatccccagtcaggaaaatgagactcaaagcactgga
tctgtaaatggagctactggtttttcccaaccagattccaccacagaagcggacaaagaa
aaggagggaaagtgtgatgaagatgacggtgagccaagtgccgccgagttgagaaggcgt
cgtctccgcaagctggagactgctcagacccctgaccactga
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