Triplophysa rosa: 130564173
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Entry
130564173 CDS
T09216
Symbol
pdlim3b
Name
(RefSeq) PDZ and LIM domain protein 3b isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
tros
Triplophysa rosa
Pathway
tros04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130564173 (pdlim3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tros04990
]
130564173 (pdlim3b)
Domain-containing proteins not elsewhere classified [BR:
tros04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
130564173 (pdlim3b)
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Glyco_hydro_2
Motif
Other DBs
NCBI-GeneID:
130564173
NCBI-ProteinID:
XP_057206075
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All DBs
Position
LG13:complement(10771224..10782112)
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AA seq
341 aa
AA seq
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MPQNVVLDGPAPWGFRLSGGKDFNQPLTITRVTPGSKASLVNLCPGDIILAIQGASTESM
THAEAQNKIKDSTNQLLLKLERPETKLWSPQVIEEGKAHPFKINLEAEKQDIDYFEHKFN
VRPKPFKSASQSSTSQRLMGNVSQVPSAVCNAVADPSKNETLVLSAQYNSPIALYSTDNV
SNTVQQAQMSAVVRQGSPSPKTLQSIEESHVYRMLQEDQEQPHEPRQSGSFKALQDYVES
DGTKPMVTRSVKAPVTKPQAATSSLQKLPLCDKCGTGIVGAVVKARDKYRHPACFVCSDC
GLNLKQKGYFFVEGQMYCETHARMRMCPPEGHDLVTVYPTA
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgccacagaacgtggtgctggacggtccagccccttggggatttcggctttctggaggc
aaggacttcaaccagccgctgactataactcgggtgacacccggcagtaaggcatcactg
gtcaatctgtgcccgggtgacatcattttggccatccagggagcgtcgacagagagtatg
actcatgccgaagctcagaataagattaaagactccaccaatcagcttctcctcaagctg
gagaggccagaaactaaactctggtcacctcaagttatagaagaggggaaagcgcaccca
ttcaaaatcaatctggaggcagaaaagcaagacatcgattacttcgaacacaagtttaat
gtccgaccaaagcccttcaaatctgcaagccaaagcagtacatcgcagaggttgatggga
aatgtatctcaggtgccatcagctgtgtgtaatgcagttgctgaccccagcaagaatgag
accctcgttctttctgctcagtacaactcccccattgcattatactcaacagacaatgtg
tcaaatacagtccagcaggctcagatgtccgctgtagtcaggcagggatcacccagccct
aaaaccctgcaatccattgaggagtctcacgtgtaccgtatgctccaggaggaccaagag
caaccacatgagccacgtcagtcaggctcttttaaggctctccaggattatgtggagagt
gatggcacaaagcctatggtgactagaagtgtaaaggccccagtaacaaagccccaagca
gccacatcctcactacagaagctgcctctctgtgataaatgtggtaccggcattgtcgga
gcggttgtgaaagcccgggacaagtaccgccatccggcctgtttcgtgtgctcagactgc
ggtttgaacttgaagcagaagggctacttctttgtggagggacagatgtactgtgaaacc
cacgctcggatgagaatgtgcccacccgagggacacgacctagttacagtgtatcccact
gcttag
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