Triplophysa rosa: 130564210
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Entry
130564210 CDS
T09216
Symbol
rnf20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tros04121
]
130564210 (rnf20)
Enzymes [BR:
tros01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130564210 (rnf20)
Ubiquitin system [BR:
tros04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
130564210 (rnf20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
KASH_CCD
BRE1
zf-RING_5
zf-RING_2
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
130564210
NCBI-ProteinID:
XP_057206134
LinkDB
All DBs
Position
LG13:6063175..6072726
Genome browser
AA seq
1007 aa
AA seq
DB search
MSGQKRSCEPSGSVALGAPPEKKKGGEDGEGMSTGSGGTTAVETVIKLGGGSNLEEQDIK
ALQIKNRKLGEALDQRQVIEDELRERVERLETRQATDDASLLILNRYWNQFDENVKLIAR
HNDQSGSEPVESQPPEGRSLKPGTPEPDGDSNPERAKDRGQGEGVSSFLATLASSSSEEI
EAALQERVESSCKQANRVVEIYENLKNTVDQLKKNLESGAGGSLWDVAVRLNTLLASENE
RLRQLTDGLQQKHSHMTSESRSLGRAANRADNRISELQALIEELQWDMEKIRRRENRLNT
HLAEVLERVNSTGYKVCGEASSVCGTITINKRKFEEMNSELEENRELAENRLGELQKLQQ
DLQTVYQENNNMKVELLSRAEEVARESAEYRCLQSQFSVLYNESLVLKSQLDETKARLNT
TRTARLRQLDHMENDEVSLQRKVRTEVIQLEDTLAQVRKEYEMLRIEFEQTLAANEQAGP
INREMRHLISTLQTHNQQMKGEVVKYKIRLRETQQELNQLRVAKGNAAVQSQSSTEVDVK
EETTSPSTPAPTSDITVKTEPDSGSATPSTTGVTVKIEPGTETEAVVKDEEKEKEKEKEK
EKEKEQREKERVTRGGPGGGAVKEEREKAGSSNQSEDLVAERCAVIGGPKRKEIEQLKIM
RAELKKAQESQREMKLLLDMYRSAPKEQRDKVQLMAAEKKTKSEAEELRQRVRELEERER
REGKKMADEEALRKIRSVEEQIDILNKKLSLAKQEEDALLSEMDVTGQAFEDMQEQNIRL
MQQLREKDDANFKLMSERIKSNQIHKLLKEEKEELADQLLTLKTQVDAQLQVVRKLEEKE
RLLQGTISAAERELALRTQALEMNKRKAQESVSLSEDVRAQLEVVQQRLVAVREEVIENS
ISREKESFNARRAQEDISKQRRKIEKAKKPAENIRNGDEILNEEINEYKARLTCPCCNSR
VKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGANDFHRIYIG
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccagaagcgctcttgtgaacccagtggctctgttgccctcggtgctcctcca
gagaagaagaagggtggtgaggatggagagggaatgagcactggatcaggaggaaccaca
gctgtagaaaccgtcattaaactgggtggaggttctaacttggaggaacaggatatcaaa
gctctgcagatcaaaaacagaaagttgggagaggcgctagaccaaagacaggtgatagag
gatgaactaagagagagagtcgagaggttggagacacgtcaggcgacagatgatgccagt
ttgttgattcttaacagatactggaaccagtttgacgaaaatgtgaagttaattgcacgt
cacaatgaccaatcaggcagcgagcctgtggaaagccaacccccggaagggcggagttta
aaaccaggcacaccagaaccagatggagactcaaatccggagagagcaaaagacagaggt
cagggagagggtgtgagttcatttctggccacactggccagcagcagcagtgaggagatc
gaggcggcgctacaggagcgggtggagtccagctgcaagcaggcaaaccgtgtggttgaa
atctatgagaacctgaagaacacagtagatcagctgaagaagaacctggagtctggcgca
ggtggcagtctctgggatgtcgctgtccggctcaacacccttctggctagtgagaatgaa
cgtctccgtcagctgacagatggtctccagcagaagcatagtcacatgaccagcgagtcc
cgttcgttgggccgtgcggcaaaccgtgcagataaccgaatcagtgagctgcaggctctt
atagaggagctccagtgggacatggagaagatcagacgaagagaaaatcgcctcaacact
caccttgcagaggtgctggagagggtgaacagtacaggctacaaagtgtgtggtgaagca
agcagtgtttgtggaactatcactatcaacaaaaggaagtttgaggagatgaacagtgag
ctggaggagaacagggagcttgcggagaatcggcttggtgaactccagaaactccaacaa
gacctgcagacggtttaccaggagaacaataacatgaaggtggagttgttgtccagggct
gaggaggtggccagagagagcgccgagtatcgctgtcttcaatctcagttctcagtgctc
tataatgagtctctagtgctgaaatctcagctggacgagaccaaagcacggcttaatacg
accaggaccgcccgtctgcgccagctggaccacatggagaatgatgaggtttcactgcag
cgtaaggtccgtactgaagtgattcagctggaggacacgttagcacaggtgcgcaaggag
tacgagatgctaaggatcgagtttgagcagacgctagctgctaatgaacaagcaggtcct
ataaaccgtgagatgcgacacctgatcagtaccctgcagactcataaccagcagatgaag
ggagaggtggttaaatataagattagactgagagagactcagcaggagctcaaccagctc
cgtgttgccaaaggcaatgctgcagtccagtcgcagtcaagcacagaggtggatgtaaag
gaagagaccacctccccaagtacaccagccccgactagtgatatcactgtgaagacggag
ccagatagcggctcggccacacccagtactactggtgtgacggttaagattgaaccaggt
acagaaacagaggctgtggtgaaagacgaggagaaggaaaaagaaaaggagaaagagaag
gaaaaggagaaagaacagagggaaaaagagagggtgacacggggtggtcccggaggcgga
gctgtgaaagaagagagagagaaagccggcagcagcaaccaatctgaagatcttgtggct
gaacgctgcgctgtgattggaggaccaaaacgcaaggagatagagcagttgaaaataatg
agagcagagcttaagaaagctcaagaatctcagagagagatgaagctgttgctggacatg
tatcgctctgctccaaaagagcaacgagacaaagtacagctgatggcagcggagaagaag
acgaagtcagaggcagaggagctccgccagagggttcgagagctggaggagcgggagagg
agagagggaaagaagatggctgatgaagaggctctgagaaagatccgttcagtggaggag
cagatcgatattctcaataagaaactctctctcgctaaacaggaggaggacgcgctgctg
agtgagatggatgttaccggccaggcgtttgaggacatgcaagagcagaacattcgtctg
atgcagcagctccgagagaaggacgatgccaacttcaaactcatgagtgagcgcatcaaa
tccaaccagatccacaaactcctcaaggaggagaaagaggagctggccgaccagttgctt
acactaaaaacacaggttgatgctcagctccaagttgtacgaaagttggaggagaaagag
cgcctcctgcagggcaccatcagcgctgcagagagggagcttgctctgcgtacacaagca
ttagagatgaacaaacgcaaggctcaggagtcagtgtcactctccgaggacgtgcgagct
cagttggaagtggtgcagcagaggttggttgctgtccgagaggaggtgatcgaaaacagc
atctcccgtgagaaagaatccttcaatgcccggcgggcacaggaggatatatccaagcaa
cgcaggaaaatagagaaggccaagaaacccgcagagaacattcgcaatggagacgagatc
ctgaatgaggaaataaacgaatacaaggcccggttgacgtgtccatgctgcaattcacgt
gtaaaggacgctgttttgaccaagtgcttccacgttttttgcttcgagtgcgtgaagaca
cggtatgacacccgccagagaaaatgcccgaaatgcaatgctgcttttggtgccaacgac
ttccatcgcatctacattggataa
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