Triplophysa rosa: 130564282
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Entry
130564282 CDS
T09216
Symbol
ssrp1a
Name
(RefSeq) FACT complex subunit SSRP1a
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tros03000
]
130564282 (ssrp1a)
03036 Chromosome and associated proteins [BR:
tros03036
]
130564282 (ssrp1a)
Transcription factors [BR:
tros03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
130564282 (ssrp1a)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
130564282 (ssrp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
HMG_box
POB3_N
SSRP1_C
HMG_box_2
HMG_WDHD1
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
130564282
NCBI-ProteinID:
XP_057206227
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Position
LG13:8364115..8380324
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AA seq
705 aa
AA seq
DB search
MGDTLEFNDIYQEVKGAWNDGRLRFGKQSVVYKSNKTGKVDSIPANELSVGQWRRVCLGH
GIKLTTSTGHVYKYDGFKDTDLEKLSAFFKANYNLELTEKDMCVKGWNWGTAKFAGPLLS
FDVNDSPAFEVPLNSVSQCATGKNEVTLEFHQNDDAEVSLMEVRFYVPPNTGDDGSDPVE
AFAQNILSKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFTKDEDFSLTLNMSEDEVDKRYE
GKLSKNMNGPLYEIVSRVMKALVNRKITVPGNFQGHSGSQCITCAYKASSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQKNQYTFSNIEREEYGKLFDFVN
AKKLNIKNRGFKEGMKGAEGYSDSDEDTHDAYLERMKQEGKIREEADGSDESEGDSDESF
NPGEEGDEVAEEYDSNASESESEGEDGDSEDEGKKKKVEKKPKKVVKEKKERKPRKEKKV
KDAGAPKRPMSAYMLWLNGNRERIKSEHPGISVTEISKKAGEMWKQLGKDRKEEWGKKAE
EAKRQYEKAMKEYKESGGGASADTKEKKKKGGKVDAKKSGGEKERKKEGVNESFKSKEFI
SSEESSSESDHSKGSKRKASNDDDDDEEEEVATTPPSSGEESGSD
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgggagacactctggagtttaacgacatctatcaagaagtgaagggtgcatggaatgat
ggcagactaaggttcggaaagcagtcagtggtctataaaagcaataagacagggaaggtg
gacagtattccagccaatgaactctctgtgggccagtggcgtcgagtctgtctgggtcat
gggattaaactgaccaccagcaccggacacgtctacaaatatgacggctttaaagacaca
gatcttgagaagctttctgcattttttaaagcaaactacaatctcgagttgacagagaag
gatatgtgtgtgaagggctggaattggggcacggccaaatttgcaggtccgctgctgtcc
ttcgacgtgaacgacagtcccgcgtttgaggtcccgctgaacagcgtttcccagtgtgca
acaggaaagaacgaagtgacattggagttccatcagaacgatgatgcggaggtgtcgctc
atggaggtccgcttctatgtcccacccaacactggagatgatggatcagaccctgtggag
gcgttcgctcagaatattctgtcgaaggcagacgttatccaagccactggagatgctgtg
tgtatattcaaagagcttcagtgccttacaccgagaggaaggtatgatatccgtatctac
cccactttcctccacctgcacggtaagacgtttgactataagatcccctacacaactgtg
ctgcgtctcttcctgctgccacacaaggaccagaggcagatgttctttgtgatcagtcta
gacccacccattaaacagggtcagacgcgctatcacttcctcattctccttttcaccaaa
gatgaagatttcagtctgactcttaacatgagcgaggatgaggtggataagcgttatgaa
gggaagcttagtaagaacatgaacggtcctctttatgagattgtgagtcgggtcatgaag
gctctagtcaaccgaaagatcacagtgcctggaaactttcaaggtcactcaggatctcag
tgtataacgtgtgcgtataaagcgagctcagggctgctgtatccgctggagagaggcttc
atctatgtgcacaagcctccggttcatctgcgctttgaggagatctcctgtgtcaacttt
gctcgagggaccaccaccacccgctcctttgactttgaaatagagaccaagcagaaaaac
cagtacaccttcagcaacattgagagggaagaatatgggaaactctttgactttgtcaat
gccaagaaactgaacatcaagaacagaggatttaaagagggtatgaaaggcgctgaaggc
tacagcgattctgatgaagatacgcatgatgcctacctggagaggatgaaacaagagggc
aagatcagagaggaggcggacggaagcgacgaatcggagggcgacagcgatgagtctttt
aaccctggagaggagggtgatgaagttgccgaagagtatgacagtaacgcctcagagagc
gaaagtgagggagaagatggagacagtgaggatgaaggcaagaagaagaaagtagaaaag
aagcccaagaaagtggttaaggaaaagaaagagagaaaaccacggaaagagaagaaagtg
aaggacgctggtgctcctaagaggccgatgagcgcttacatgctgtggctcaacggcaac
cgagagcgaatcaagagtgagcatcctgggatctcggtgactgaaatctcaaagaaggct
ggagagatgtggaaacaactgggcaaagaccggaaagaggagtgggggaagaaagcagaa
gaggccaaaagacaatatgaaaaagctatgaaagaatataaagagagtggaggtggagcg
tctgctgatactaaagaaaagaaaaagaaaggaggcaaggtggatgctaagaagagtgga
ggagaaaaggagcgaaagaaggaaggtgtgaacgaaagctttaagagcaaagagttcatc
tccagtgaggagagctcatcggaatcggaccacagcaaaggcagcaagcgcaaggcatct
aatgatgatgatgatgatgaggaggaggaagtcgccaccacgccacccagctcaggagag
gagtcggggtctgactaa
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