Triplophysa rosa: 130564331
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Entry
130564331 CDS
T09216
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM50-like
KO
K12024
tripartite motif-containing protein 50/73/74
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tros04121
]
130564331
Ubiquitin system [BR:
tros04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
130564331
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
TRIM_CC
zf-RING_2
zf-RING_5
Sina_RING
MTUS1_CCDC69_CC1
zf-Nse
U-box
RING_XB3-XBAT31
zf-RING_6
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
130564331
NCBI-ProteinID:
XP_057206280
LinkDB
All DBs
Position
LG14:6075165..6084027
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AA seq
482 aa
AA seq
DB search
MDRRWSVESLEDQLRCPVCLEIFTEPLILQCGHSYCRGCVRAISVNPLGQLQCPVCRCAV
DADCPPPNVALARIVDAVRSLNTPDEGPLEICAQHNNPLSLYCEDDRALICGLCGSIGAH
RAHKVTPINSVYSSMKEDISCLMTEFQTQRRKLEEQICKMDFNKSRITNESDVLKWVVRK
EFGELRRCLELEEAGFMEKVENAASTLISSIQRQAEHVSQLLAKIQSAEATLDALSNDGH
LEFIAKYGSIAPRLREGQQREQRDEKIYSSIQFNPGFSHNDIKMYVWKRLHRRVLPAPEH
LKFDPLTAHPMLHLSKDSTKVECGILLNRLPNNPERFSYSYCVLASRGFSSGKHYWEVQV
GAKPKWRIGLIKGTASRKGKLFKSPENGVWLMGLREGRLYEAFTTPRVVLPLSTHPQRLG
VFLDYESGQITFYNADSEDELGFIYSYQAELQGKVFPLFDVCWHERGVNKLPLSLTQALT
HR
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggaccggcgctggagtgtggagtctctggaagatcagctccgttgccccgtgtgtctg
gagatctttaccgagcctctgatcctccagtgcggtcactcgtactgccgcgggtgcgtg
cgcgctataagcgtgaacccgctcgggcagctgcagtgtcccgtgtgccgctgcgcagtg
gacgcagactgtcctccgcccaatgtagcgctggctcgtatcgtagacgccgttcggagc
ctgaacacacccgatgagggcccgttggagatctgcgctcaacacaacaacccgctcagt
ctttactgtgaggacgaccgggcgctcatctgcgggctgtgcgggagtatcggggcgcac
cgggcgcacaaggtcacgcccattaacagcgtctacagcagcatgaaggaggacatctca
tgtttgatgactgagtttcagactcagaggaggaagcttgaggagcagatctgtaaaatg
gactttaataaatctcgcatcaccaatgaatcagatgtgttaaagtgggtggtgcggaag
gagtttggagagctccgccgctgtttggagctggaggaggcaggtttcatggagaaggtg
gaaaacgctgcctccacccttatctcctccatccagagacaggctgaacacgtgagccaa
ctgctggccaagatccagtctgctgaggccacactagatgctctgagcaatgacggccat
ctggagttcatcgctaaatatggatccattgctccaagattgcgtgaaggccagcagagg
gagcaaagagatgagaaaatatacagctccatccaatttaatcctggattcagccacaat
gatattaaaatgtatgtgtggaaacgacttcacaggagagtcctgcccgcaccagagcat
ttgaagttcgaccccttgacagcccaccctatgctgcatctcagtaaagacagcaccaag
gttgagtgtggcatcctcctcaatcgcctgcccaataatcccgagcgtttcagctacagc
tactgcgtgctcgcctctcggggcttctcctccggcaaacactactgggaagtccaggtg
ggcgccaaacccaaatggcggatcggactgatcaaaggaaccgcgtcacgtaaaggcaaa
ctcttcaaaagcccagagaacggagtgtggctgatgggcctgagggaaggccgcttgtac
gaggctttcaccactccacgggtagttctgcccctcagcacccacccgcagcgtttagga
gtttttctggactacgagagcggacagatcactttctataatgcggacagcgaggatgag
cttggatttatctactcgtatcaagccgagctgcagggaaaagtgttcccgctgtttgat
gtgtgctggcacgagcgcggagtcaacaagctgcccctctccctgacacaagctctcact
cacagataa
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