Triplophysa rosa: 130564377
Help
Entry
130564377 CDS
T09216
Symbol
copb1
Name
(RefSeq) coatomer subunit beta
KO
K17301
coatomer subunit beta
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130564377 (copb1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tros04147
]
130564377 (copb1)
Membrane trafficking [BR:
tros04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
130564377 (copb1)
Exosome [BR:
tros04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
130564377 (copb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatamer_beta_C
Coatomer_b_Cpla
HEAT_2
HEAT
Cnd1
HEAT_EZ
Arm
MMS19_N
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
130564377
NCBI-ProteinID:
XP_057206418
LinkDB
All DBs
Position
LG1:15125059..15135559
Genome browser
AA seq
953 aa
AA seq
DB search
MTAAENVCYTLINVTNDSEPPSEVSLKADLEKGEIKAKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGKLLQEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKESELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVHTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLIELKEHPTHERVLQDLVMDILRVLTTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAASVIPVLMEFLSDTNEAAAADV
LEFVREAIQRFDNLRPLIIEKMLEVFHTIKTVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVENELKKEAGEVKPEEEVTAAPAPKLVTEMGTYVTQSALSTSRPSKKEEDRP
PLRGFLMDGDFYVAASLATTLTKVALRYVALVEDKKRQNAFVAEAMLIMATILHLGKTSL
PKKPITDDDVDRLSLCLKVLSECSPLMNDIFNKECRRSLSHMLAVRLEEEKLSQKKESEK
RNVTVQADDPISFMQLTAKNEMTSKEDQFQLSLLAAMGNTQRKEAADPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPASCTDAEF
RQMWAEFEWENKVTVNTNITELNEYLQHILKSTNMKCLTPEKALSGICGFMAANLYARSI
FGEDALANVSIEKPIHMGPDAPVNGHIRIRAKSQGMALSLGDKINLSQKKTAS
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgcagagaatgtgtgttacaccctcatcaatgtcaccaatgactctgaacca
ccatcagaagtcagcttgaaagctgatttagaaaagggggagatcaaagccaagaccgag
gctttgaagaaagttatcatcatgatcctgaatggtgagaaacttccagggctgttaatg
accatcatccggtttgtcctgccccttcaggatcacacgattaaaaaactgctactagtt
ttttgggagattgttcccaaaactactcctgatggcaaacttcttcaggagatgatcttg
gtctgtgatgcctatagaaaggatctccagcatcccaacgagttcatccgtggctccact
ctgcgcttcctgtgcaagctgaaggagtctgagctgctggagcccctcatgcccgcgatc
cgtgcctgcctggagcatcgtcacagctacgtgcgtcgcaatgcagttctggccatctac
actatctacagaaactttgagcatttgatcccagatgccccagagctgatccatgatttt
cttgtgaatgagaaagatgccagttgcaagagaaacgcttttatgatgctgattcatgca
gatcaggatagagctctggactaccttagcacttgtattgatcaagtgcatacttttgga
gatattctacagcttgtcattgtggaactgatttataaggtctgtcatgccaacccctca
gagagagctcgcttcatccgttgcatctataacctgctgcagtcctctagtcctgcagtt
aaatatgaagcagctggcacactggtcactctatccagcgctcccacagccatcaaggct
gctgctcagtgctacattgatctgatcattaaagagagtgataacaacgtcaagctcatc
gttctcgaccgactcatcgagctgaaggaacacccaacacatgaacgagtgctgcaggac
ctggtgatggatattctgagggttttgaccacccctgatcttgaggtccgcaagaagacc
ctgcagttggccctggatttggtgtcgtcccgcaatgtagaggagctggttatagtgctg
aagaaagaagttatcaaaaccaacaatgtaagcgagcatgaggacacagacaagtacagg
cagctgctagttcgtacactgcactcgtgtagcgtgcgcttccctgacatggcagccagc
gtcatccctgtgctgatggagttcctgagtgacacaaatgaggcggccgcagctgatgtg
ctggagtttgtgcgggaggctattcaaaggttcgacaaccttagacctctcatcattgag
aagatgctagaggtcttccacactatcaagacggtcaagatttatagaggagctttgtgg
attttgggtgaatactgcagcactaaagaagacatccagagtgtgatgacagaagtgcgc
agatccttgggagagatccctatcgtggagaacgagttgaagaaggaggctggcgaggtg
aaaccagaggaggaggtaactgccgctccagctcctaaactggtgacagagatgggcact
tacgtcactcaaagtgctctcagcacctccagaccatcaaagaaagaagaggacaggcct
ccactaaggggttttctgatggatggcgacttctatgttgctgcctcattggccaccacc
ctcaccaaagtggccctacgctatgtcgccctcgtcgaagacaagaaaagacaaaatgct
tttgttgcagaagccatgttgatcatggccaccatcctccatctgggcaagacctctcta
cccaagaaacccatcaccgatgatgatgtggaccgcctctctctgtgcctcaaagtcctg
tccgaatgctcacccctcatgaatgatatcttcaacaaggagtgccggagatccctttcc
catatgcttgctgtcaggctggaggaagagaaactctctcagaagaaagagtctgagaag
cgtaatgtgacggttcaggcagatgaccccatttccttcatgcagctcacagctaagaat
gagatgacatccaaagaggaccagttccaactcagtctattggccgctatgggcaacact
cagagaaaagaggccgcagacccactggcctccaaacttaacaaggtgacgcagttgact
ggtttctcggatccagtctatgcagaagcgtacgtccatgtcaatcaatacgacatcgtc
ctagatgtcctggttgttaatcagactagcgacactctacagaactgcacattggagctg
gcaacacttggtgatcttaaactggttgagaaaccatctcctctcacattggctcctcat
gactttgctaacatcaaagccaatgtaaaagtggcctccacagagaacgggatcatattt
ggaaacatagtgtatgatgtgtctggagcagccagtgacagaaactgtgtcgtgctgagc
gacattcacatagatatcatggactacatccagcctgcctcctgcacagacgcggagttc
cgacagatgtgggctgagttcgagtgggagaacaaggttaccgtcaacaccaacatcaca
gaactgaatgagtatcttcaacacatccttaagtccaccaatatgaagtgcttgacccca
gagaaggctctttctggcatctgtggctttatggcggcaaacctgtacgcccgctctata
tttggggaagatgcccttgcaaacgtcagcattgagaagcccatccacatgggtcccgat
gccccagtcaacggtcacattcgcatccgtgccaagagccagggaatggctttgagtctg
ggcgacaagatcaacctctcccagaagaagacagcatcttaa
DBGET
integrated database retrieval system
