Triplophysa rosa: 130564404
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Entry
130564404 CDS
T09216
Symbol
msi2b
Name
(RefSeq) RNA-binding protein Musashi homolog 2b isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
tros
Triplophysa rosa
Pathway
tros03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130564404 (msi2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tros03019
]
130564404 (msi2b)
Messenger RNA biogenesis [BR:
tros03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
130564404 (msi2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
PHM7_cyt
TASOR_alpha-beta
Motif
Other DBs
NCBI-GeneID:
130564404
NCBI-ProteinID:
XP_057206435
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Position
LG14:complement(16813479..17056994)
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AA seq
408 aa
AA seq
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MEGDGSQATSGSPNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKR
SRGFGFVTFADAASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN
TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMV
ECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLSYPNIVATYGRGYTGFAPSYSYQ
FPGFPATAYGPVAAAAAVAAARGSGRGARGRGGYAAYLQSTGPGFPDYGFYSSPSDQRAP
PFSFADYGSLGPQAAQLLQSEHATSACNSPLQHLASPDQYKSPGTNPPRPGAFPGASSPG
PVADLYGPTSQDSGVGNYISAASPQPGSGFGHSIAGPLIATAFTNGYH
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggagggagacgggagccaagccacatctggaagccctaacgattcgcaacacgacccg
ggtaaaatgtttatcggtggcctcagctggcaaacttcaccagacagccttagagactat
tttagtaaatttggagaaatcagagaatgtatggtgatgagggatcccacaacaaaacgc
tccaggggatttggcttcgttacgtttgcggatgcggccagtgtagataaggtcttagct
caacctcaccacgaattagactcaaagacgattgatcctaaagttgcctttccaagacgc
gctcaacccaagatggtcacgagaacaaagaaaatatttgtaggcggattatcggctaac
acagtagttgaagatgtgaagcagtatttcgaacagtttggcaaggtagaagatgctatg
cttatgtttgataaaactacaaatagacatagagggttcggctttgtaactttcgagaac
gaggacgtggtggaaaaggtctgcgagattcattttcacgaaatcaataataaaatggta
gaatgtaagaaggcccagcctaaggaagtgatgtttcctccggggacgcgggggagagcc
agaggtctgccctataccatggacgccttcatgctgggtatgggcatgctgagttatcca
aacattgtagcaacgtatggccgtggatacactggtttcgctccgagctacagctaccaa
ttccctggtttcccggcaacagcgtacggtccggtagcggcggcggcagctgtggcagcg
gcgcgtggctcaggtaggggggcccgtggaagaggcggctacgcagcataccttcagagc
acagggccaggcttccccgattacggtttctattcttcaccaagcgaccaacgggcaccc
cccttctcctttgcggactatggctccctgggcccccaggcggctcagctgctgcaaagc
gagcatgccacatcggcctgcaactcccctctccagcacctggccagcccggatcagtat
aaaagcccaggcaccaatccgccccggcctggagccttccctggagccagcagccccggg
ccagtggctgacctgtatggcccgaccagccaggactccggcgtgggcaactacattagc
gctgctagtccccagcctggctccggcttcggacacagcattgctggtcctttgattgcg
acagcttttacaaatggataccattga
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