Triplophysa rosa: 130564544
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Entry
130564544 CDS
T09216
Symbol
srsf1a
Name
(RefSeq) serine/arginine-rich splicing factor 1A
KO
K12890
serine/arginine-rich splicing factor 1
Organism
tros
Triplophysa rosa
Pathway
tros03040
Spliceosome
tros05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130564544 (srsf1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
130564544 (srsf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tros03041
]
130564544 (srsf1a)
Spliceosome [BR:
tros03041
]
Common components
Common spliceosomal components
SR proteins
130564544 (srsf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Nup35_RRM_2
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
130564544
NCBI-ProteinID:
XP_057206653
LinkDB
All DBs
Position
LG14:complement(10395478..10401759)
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AA seq
271 aa
AA seq
DB search
MSGGGVIRGPAGSNDCRIYVGNLPPDIRTKDVEDVFYKYGAIRDIDLKNRRGGPPFAFVE
FEDPRDAEDAVYARDGYDYDGYRLRVEFPRSGRGMGRGGGGGGGGGGGGGGGGGGGGGGG
GGGGGFGGGAPRGRYGPPSRRSEYRVIVSGLPPSGSWQDLKDHMREAGDVCYADVFRDGT
GVVEFVRKEDMTYAVRKLDNTKFRSHEGETAYIRVKVDGPRSPSYGRSRSRSRSRSRSRS
RSNNRSRSFSPRRSRGSPQYSPRHSRSRSRS
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtggtggtgttatccgcggccctgctgggagcaatgactgccgcatttatgtg
ggcaatttgcctcctgatatccgcactaaagatgtcgaagacgtgttttataagtatggg
gctattcgcgatatcgatctaaaaaacagacgaggtggacctccatttgcctttgtcgag
tttgaagaccccagggatgcagaagatgccgtttatgctcgggatggctatgactatgat
ggttatcggcttcgagtggagttcccaaggagtggacggggtatggggagaggaggaggg
ggaggtggtggtggcggcggcggaggaggtggaggagggggaggaggaggcggcggcggc
ggtggtggtggtggttttggaggtggtgctccaaggggtagatacggacccccatccaga
cgttctgagtacagagtaatagtttcaggtcttccaccaagcggtagctggcaggacttg
aaggatcacatgcgtgaagcaggtgatgtatgttatgctgacgttttccgagatggaact
ggcgtggtggagtttgttcgtaaagaagacatgacctacgctgttcgaaaactggataac
acaaaattccgatcgcatgagggagaaaccgcatacattcgtgtgaaggtggatggtcct
cgcagtccaagctatggaagatcaaggtccagaagccgcagtcgcagcaggagtcgcagc
cgcagcaacaaccgcagccgtagcttctccccacggcgcagccgaggatccccgcagtac
tctcctcgccatagccgttctcgctctcggtcctaa
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