Triplophysa rosa: 130564596
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Entry
130564596 CDS
T09216
Symbol
arhgef12a
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
tros
Triplophysa rosa
Pathway
tros04270
Vascular smooth muscle contraction
tros04625
C-type lectin receptor signaling pathway
tros04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
130564596 (arhgef12a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
130564596 (arhgef12a)
09153 Circulatory system
04270 Vascular smooth muscle contraction
130564596 (arhgef12a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130564596 (arhgef12a)
Membrane trafficking [BR:
tros04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
130564596 (arhgef12a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PH_13
PDZ_2
SOS1_NGEF_PH
HAT_PRP39_N
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
130564596
NCBI-ProteinID:
XP_057206764
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All DBs
Position
LG14:13048113..13109593
Genome browser
AA seq
1368 aa
AA seq
DB search
MSDTRSTLTDRSSSILSKDHPPDKRSKSDKLPGTPTHDFDPTDVLVQKSGFVVADGRPES
CGLVQRCVIIQKDENGFGLTVSGDNPVFVQLVKQDGAAMRAGVQTGDRIIKVNGTLVTHS
NHVEVVKLIKSGSYVALTVLGRPPGLPQVPLPELDLCREETFVTTPDSYSATERTSSLVS
WEESSVPHNQRLDNKRIVSREQQDMQGLKDEHNKTSKPLWDVQEAKMHIPHPLNRATHEG
LYLRNTEDGCWTDEDKGDLSPVQRRFYPASPVSQRDSNCSSPKSTPRDSLNSCPSPDVDD
RCDLDSRLQTSVRSPPSRQTSEIIVLEDEDFDTEQEQVNGQCSCFQDIELLKTRPAHLAV
FLHHVISQFDPAPLLCYLYADLYKHTNSKEARRIFTDFLGFFIDRGAHLKVAVPESISYE
LERRRLELIPEELHRQYIQTMQETLLPDVQRHLEDFRQKRNMGLTLAEVELARLDSEHLL
VERERACAENILSKIDDVLVTSQPTEEEKCTTMQYVIYTYMKHLGLRVKEHRILESKRPR
IHFLPSKLRKSKTEKEGEEKLKKPRFPIRVPPRWPVRIESIAGGKAGESFKQRPQKQMSQ
PAMGGSEPIEGGRLRGSQSSEGSDLLQSPGIITSPPFSSPYSSPSDPSGRETEFSMSPSA
VVPRLSDGLQAGDVLDSIYPPCDYIPYSVDPLDEDREGDRLLDVGTPKLIRRFEELQSED
DQGSDVYSDVDPPNWQQLVGRDVLAGLTPHEIKRQEVINELFYTERAHVRMLKVLDRVFY
QKLNRDNILPPADIKNIFTNLEDIIQLHMRIADHMTAIRKKYESSVIDHIGDELLSWFSG
GEEEMIKHAVCTFCSNQPFALELIKSRQKKDQRFTTFMQEAESNRLCRRLQLKDIIPAEM
QRFTKYPLLMDNIAKYTDEEEEKDKVRRAAECCRKILNHVNQSVKESENKQRLEDYQRRL
DLSSLKQSENPMISEFKNLDLTKRKMVHEGPLSWKINKDKTIELYTLLLEDILVLLQKQD
ERLILRCQSKNLAGTADTKHIFSPIIKLSTVLVRSVATDNRSFFVISMSENGAQIYELMA
QTVSDQRMWQRQISQRADVMKAAKIHSVILLPQSDGDRDSVELSKFSKGSDRISTGSVQS
AEKDFSPSAALRDCVPDTSEEDRVQRAGRDGSYLVSELMNDKDTDSIASSSKADEALKTL
AALKQVLVTQLMAQDEGEHLGRSAGSRLLRTTSLRTPVEHSSIRTPSRAQDYTSGDTGFY
ECPEDYAAYLVLEGYGGSGESSTDDDIQVGRKELGLAHSCAADSGISLKFSSPSSGSTSR
LSRQVLSHLRSLQANLNHLKEMETKYYNLLRQRPVGSTTDTDESRDKK
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacacacggtccacactcactgacagaagcagtagcatcctcagcaaagatcac
cctcctgacaagaggtccaaaagcgacaagctgcctggaacccctacacacgattttgac
cctacagacgtgctggtgcagaagagtggatttgtagtggctgacgggagacccgagtcc
tgtgggctggttcagagatgcgtcatcatacagaaagatgagaacggttttgggctgacc
gtcagcggggacaaccctgtttttgtgcagctcgtcaaacaagatggagctgccatgcgt
gcaggtgttcaaaccggggacaggatcattaaggtgaacgggacattggtgacgcattca
aaccacgttgaagtggtgaagttaatcaaatccggctcttatgtggccctgacagtatta
ggtcgaccccccgggttgccccaggtccccctccctgagctagacctatgccgtgaggag
acttttgttacgacccctgactcgtacagcgcaaccgaacgcacctcctctctggtatca
tgggaagagagcagcgttccacacaaccaaagattggacaacaagaggattgtgtccagg
gagcaacaggacatgcagggactgaaggatgaacacaacaaaacatccaaaccgctatgg
gacgtccaagaagctaagatgcacattccacatccgctcaacagagctacacatgagggt
ctgtatctcaggaacactgaagacggatgctggacggacgaggataaaggagacctcagc
cctgtccaacggcggttctacccggcctctccggtgagccaaagagattccaactgctcc
agtccaaaaagcacccccagagacagcctcaactcctgcccgtccccggatgtcgacgac
agatgtgacctggattctcgcctccagacatccgttaggagcccaccctcccggcagact
tcggagatcatcgttcttgaagatgaagactttgacactgagcaggaacaggtgaacggc
cagtgtagctgcttccaggacatcgagctgctcaagactcgtcctgctcatctcgcggtg
ttcttgcatcatgtgatctcacagtttgaccctgcacctctgctctgctacctgtatgcc
gatctctacaagcacaccaactccaaagaagcacgtcggatcttcactgacttcttaggg
ttcttcatagaccggggggcacatttgaaggttgctgtgcctgaatccatctcctacgaa
ctcgagaggagaagactggagctgattcctgaagaattgcatagacagtatatacagaca
atgcaggaaactcttcttccagacgtccagagacacctggaggacttcaggcagaaacgc
aatatgggcttgactctggctgaggtggagctcgctcggctggactctgaacatctgctt
gtggagagagagagagcgtgtgccgagaacatcctctcaaagatcgatgatgtcctggtg
acttcacagcccacagaagaggagaaatgcacaacaatgcagtatgttatatacacgtac
atgaagcatctgggactccgagtcaaagagcatcgaatccttgaatcgaagcgaccccga
attcattttcttccttccaagctgaggaaaagcaaaacggagaaggaaggagaggagaaa
ctcaaaaaacctcgcttccccattcgggtgcccccacggtggcctgttcgcatcgaatca
attgcaggtgggaaggcaggagaaagcttcaagcaaaggcctcaaaaacagatgtctcaa
ccagcgatgggcgggtcagagccaatagagggtggacgtctgcggggcagtcagtccagt
gagggctcagatctcctacagagcccgggaatcatcacctctccacccttcagcagccct
tacagctcaccgtcagacccctctggaagggagacggagtttagtatgagcccttctgct
gtggttccacggctaagtgacggcctgcaggctggagatgtgctggacagcatctaccca
ccctgtgactacatcccatatagcgtggaccccctggatgaggacagagagggagacaga
ctccttgatgtgggcacacccaaactgattagaaggtttgaggagctgcagagtgaagat
gatcaggggagtgacgtttactctgatgtagatcctccaaactggcagcagctggtgggg
cgtgatgttctagcaggcctgacaccccacgagatcaaacgacaagaagtcataaatgag
ctgttctacacagaacgagcacacgtgcgcatgctgaaggtcctggatcgcgtgttctac
caaaaactcaaccgggacaacatactgccccctgctgacattaaaaacatattcaccaac
ctggaggacatcatccaattgcacatgaggatagcggatcacatgactgcaatacgcaag
aagtatgagtcatcggttattgaccacataggagatgagttactgtcttggtttagtggt
ggagaggaagagatgatcaagcatgcggtgtgcactttttgcagtaaccagcctttcgcc
ctggagctcatcaaatcccgacagaagaaggaccagcgtttcaccaccttcatgcaggag
gctgaaagtaatcgactgtgccgaagactccagctgaaggacatcatccctgcagagatg
cagaggttcacaaagtaccctttactgatggacaacattgccaagtacacagatgaggag
gaggagaaagacaaagtgagacgagcggccgagtgctgtcgaaagattctcaaccacgtc
aaccagtccgtgaaggagtctgagaacaaacagagactggaagactaccagcgacgactg
gacctctcctcgctgaaacagagtgagaaccccatgatctcagagttcaagaacttggat
ctcactaaacggaaaatggtccacgagggtcctctgtcttggaaaattaacaaagacaaa
actattgagctgtatactttactcctggaagacatcctggtactgttgcagaagcaggac
gagcgtcttattctcagatgtcagagtaagaacctcgcgggtactgctgacaccaaacac
atcttcagtcccatcatcaaactcagcactgtgctggtgcgctcggtggcgacagacaac
aggtctttcttcgtgatctccatgtctgaaaacggagctcagatctatgagctgatggcc
cagacggtgtctgatcagagaatgtggcagcgacagatcagtcagagggcagatgtcatg
aaggccgccaaaatacacagcgtcattctgttacctcagagcgatggggaccgtgacagt
gttgaattgagcaagttcagcaaaggctccgaccgcatctccacgggaagcgttcagtcg
gcagagaaagatttttccccatcggcagccttgcgggattgtgttcctgacacttcggaa
gaggaccgggtacaaagagctggccgggacggctcctatctggtctcagaactgatgaac
gacaaggatacagattctatcgccagttcatctaaagcagatgaggccctgaaaactttg
gctgcgctgaagcaggttttggtgactcagctcatggctcaggatgagggcgagcatctg
ggccgatcggccggcagccgtctcctcaggaccacgtcgcttcgcacgccggtggagcac
agctctattcgaacccctagccgagctcaggactacacctctggagacacgggtttctac
gagtgtccggaggactacgcagcttatctggttctggaggggtacggaggttcgggtgag
agcagcaccgatgacgacattcaggttggcaggaaggagctgggtttggcgcacagctgc
gctgcagattcgggtatcagcctcaagttctcctcaccctcctcaggcagcacgtctcgc
ctcagcagacaggtcctttcacatctccgcagcctgcaggccaacctcaaccacctcaag
gagatggaaacaaagtattataatctgcttcgccaaaggcctgtcggttccaccacagat
acagatgagagcagagataagaaatag
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integrated database retrieval system
