Triplophysa rosa: 130564802
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Entry
130564802 CDS
T09216
Symbol
rnf169
Name
(RefSeq) E3 ubiquitin-protein ligase RNF169
KO
K20805
E3 ubiquitin-protein ligase RNF169 [EC:
2.3.2.31
]
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tros04121
]
130564802 (rnf169)
03400 DNA repair and recombination proteins [BR:
tros03400
]
130564802 (rnf169)
Enzymes [BR:
tros01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
130564802 (rnf169)
Ubiquitin system [BR:
tros04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
130564802 (rnf169)
DNA repair and recombination proteins [BR:
tros03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
130564802 (rnf169)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf-RING_UBOX
zf-RING_4
zf-RING_2
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
130564802
NCBI-ProteinID:
XP_057207175
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All DBs
Position
LG14:complement(5669491..5678877)
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AA seq
636 aa
AA seq
DB search
MKMAAVGSAGPGQRGKTRPGALSAPLTLEEARCPVCSEILLEPVTMPCGHSVCLHCFQRT
VKLISLCCPLCRLRVSSWARKQSREKSLVNTELWDLVRLSHPERCKRRMEQRDVETPDGD
IFRAPVPIHKPGEMRQEYEKLKIKGGGVEETEERKKKVPLHRKEECGMLKHCQHPFCGVS
DSENEEPIGKRTRHVSAFVRKTKCSPAFNKSCLHSSAVQRSRSCTDSEDGRGKNKSHTHH
AVPEKASITHSYNAGILLSSENSRSLSAPLLSLDKKHHWRGVHTSASSLVLQTKCERSIS
PESNDSISEELNHFKPIVCSPCTPPKRLPDGRLLEPTIVKSTPRNLTRSLHKSTSYEASP
TILQKWKQIEVDRQCIKVISKGTITSPFAEDLSLKLSPVEERDGQYCSCVVAKDGFQDHQ
CVCSASVKSCKNRKEKHAVSNKRRLVFDQCTKEEGTPPASALIRLTTQTVTDTQEGHSRC
ETLCKYGPEVNETMFDKCVKHCNQSTVDPDNLINDSATRSCVLNRPTSRRGKKRSHKTKH
LEDAVQAKISRTDSCNACDRFDDLIIRRMNQEKIDRDLALKLQRQFDRECQKVDRHKTSC
NKYELRSWATKDGVVGRNTRRSGRISKRNEHFNDSC
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggcggcggtggggtccgctggaccggggcagagaggcaaaacaaggcctggc
gctctctctgcacccctgactctggaggaagccaggtgcccggtatgttcagaaatactg
ctggagcccgtaacgatgccatgcggacactcggtgtgcctgcattgcttccaacggacg
gtgaagttgatcagtctgtgttgtccgctgtgccggctgcgggtgtccagctgggcccgt
aaacagtcccgggagaagagcctggtcaataccgaactctgggacctggttcgcctcagt
cacccggagaggtgtaaacggaggatggagcagagagatgtagagacgccggacggagat
attttccgagcacctgtacccattcataaacctggagaaatgcggcaagagtacgaaaaa
ctaaaaatcaagggtggaggcgttgaagaaactgaggagagaaagaaaaaagtccctttg
cacagaaaggaagagtgtgggatgctcaagcattgtcaacatcctttttgtggagtttca
gactctgagaatgaagagcccataggaaagaggacccgacatgtgtctgcgtttgtgaga
aagacaaagtgctcccctgctttcaataaaagttgccttcatagcagtgccgttcaaagg
agcaggagctgtacagactctgaggacggcagaggaaaaaacaaaagtcacacacatcat
gctgtccctgaaaaggccagcatcactcatagttacaacgctggaattcttctgtcctct
gagaacagtcggtcattatctgccccgctactcagtctagataagaagcaccactggcgg
ggtgtccacacgtctgcttcctcactcgtgcttcaaactaaatgtgagaggtccattagc
cctgagagcaacgatagcatatcagaagaactcaatcacttcaagcctatcgtctgctcg
ccatgcactccgcccaaacgactgcctgacgggcgacttttggaaccgacgattgtgaag
tcaacccccaggaacttgacacgcagtctgcacaagtcaacgagctacgaggccagcccc
accatcctgcagaagtggaagcagattgaggtggaccgtcagtgcatcaaggtgatatca
aaaggtaccatcacaagtccgtttgcggaggatcttagccttaaattgagtcccgttgaa
gagcgggacggccaatattgcagttgtgttgtagccaaggatggttttcaggatcatcaa
tgcgtttgcagtgccagtgtgaaatcgtgtaaaaatcggaaggaaaaacatgccgtttct
aacaagcgccggcttgtttttgatcagtgtaccaaagaggaaggtacaccaccagctagt
gctctcatcaggttgacgacacaaactgtcacagatactcaagaagggcacagcagatgt
gaaacactttgtaaatatggaccggaagtgaacgaaacgatgttcgacaagtgcgttaaa
cattgtaatcaaagtactgtagaccccgacaaccttataaatgactccgctaccaggagt
tgtgtacttaacagacctacctcaagacggggcaaaaagagaagccacaaaaccaaacat
ttagaagacgctgtacaagcgaaaatatccaggacggacagttgcaatgcctgcgacagg
tttgacgatctgatcattcgacgaatgaatcaggaaaagatcgacagagatctggcgctg
aagctgcaaagacaatttgacagagaatgtcaaaaagtggacagacacaagacaagctgt
aacaaatatgaactacggtcctgggccactaaagatggtgtagtaggacgtaatacacga
agatcaggaagaatctctaaaagaaacgagcactttaacgacagttgttaa
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