Triplophysa rosa: 130564873
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Entry
130564873 CDS
T09216
Symbol
rffl
Name
(RefSeq) E3 ubiquitin-protein ligase rififylin isoform X1
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tros04121
]
130564873 (rffl)
Enzymes [BR:
tros01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
130564873 (rffl)
Ubiquitin system [BR:
tros04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
130564873 (rffl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF34L-like_3rd
SAP_RNF34_RFFL
FYVE_CARP1-2
zf-C3HC4_3
FYVE_2
ARMET_C
FYVE
Prok-RING_4
zf-RING_5
zf-C3HC4_2
SDE2_2C
MUG2_C
Motif
Other DBs
NCBI-GeneID:
130564873
NCBI-ProteinID:
XP_057207279
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All DBs
Position
LG14:5964372..5991311
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AA seq
362 aa
AA seq
DB search
MNFAIQHSRSVWSMWASCCGWLCLDDSTVEETRSSTRHQAFTNSGFSSSPSPPAPEPTCK
ACGGQFDILARKHTCMDCKKSYCSRCSAQQDLQPWLCHTCHRFHGILFERAELMKLKVKD
LRDYLHLHEVATQMCREKEELVELVLGQHTPTSETHIPLPTSIHLDQQQTPGIPVITASP
SGNNAVTELGPQDQATEDEQSLSVAEVTTESDMDADLHVEQELQSSDSEEVFAPGRRASL
SDLRSAEDIEALSVRQLKEILARNFVDYKGCCEKWELMERVKRLFQDQKDLQTIISNAME
GTDTGTGTPGEENICKICMDSPIDCVLLECGHMVTCTKCGKRMNECPICRQYVVRAVHVF
RS
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcgcaattcagcacagcagaagcgtgtggagtatgtgggccagttgctgcggc
tggctctgcctggatgattccacagtggaggaaaccagaagtagcacacgtcaccaggcc
ttcaccaactcgggcttcagcagttccccgtctcctcccgcacctgaacccacatgcaag
gcatgtggaggtcaatttgacatcctcgccaggaagcacacatgcatggactgcaagaaa
agttactgcagtcgctgctccgctcagcaggacctccagccgtggctctgccacacctgc
catcgttttcacggcatcctgtttgagcgagccgagctgatgaagctcaaagtgaaagac
ctgagagactacctgcacctgcacgaagttgccacgcagatgtgccgggagaaagaagag
ctggtcgagctggttctcggccagcacacgcccacatccgagacacacattccactccct
acaagcatacacttggatcaacagcagacccctggtattccagtcataacagcgagccca
tcagggaacaatgctgtcacagaattgggaccccaggatcaagcaactgaagatgaacag
agcttgtcagtggcagaggtgacaactgaaagtgacatggacgcagatctgcatgtggag
caggagttgcagtcatcagactccgaggaggtgtttgcccctgggcgacgggcgtcactg
tcagacctcaggtcagcggaggatatcgaggctctgagtgtccggcagttgaaggagatt
ctggcaagaaactttgtggactacaaaggatgctgcgagaagtgggaactgatggagaga
gtcaagcgtctcttccaagaccagaaagacctgcaaaccataatatcaaatgccatggaa
ggcacagacacagggaccgggacgcccggtgaggagaacatttgtaagatctgtatggac
tcacccattgactgtgttcttttggagtgcggacacatggtcacatgcaccaagtgcggc
aagcgcatgaacgaatgccccatatgccggcagtacgtggtgcgggcagtgcacgtgttc
aggtcctga
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