Triplophysa rosa: 130564919
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Entry
130564919 CDS
T09216
Symbol
prpf8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
tros
Triplophysa rosa
Pathway
tros03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130564919 (prpf8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tros03041
]
130564919 (prpf8)
Spliceosome [BR:
tros03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
130564919 (prpf8)
Complex C
U5 SnRNP specific factors
130564919 (prpf8)
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Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
130564919
NCBI-ProteinID:
XP_057207361
LinkDB
All DBs
Position
LG14:complement(15826660..15839696)
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AA seq
2342 aa
AA seq
DB search
MAAAFPYRGVPGTMPPGVPPPPPAAAPIPDYMTEEKLQEKARKWQQLQAKRYSEKRKFGF
VDTQKEDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQI
RDVPVLYHITGAISFVNEIPWIIEPVYIAQWGSMWIMMRREKRDRRHFKRMRFPPFDDEE
PPLDYADNILDVEPLEAIQMELDTEEDSSVVDWLYEHQPLKDSNKYVNGTTYRRWQFTLP
MMSTLYRLANQLMTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDW
NEFNDINKIIIRQPVRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFD
PLINPISHRHSVKSQEPLPDDDEEFELPEYLEPFLKETPLYTDNTANGIALLWAPRPFNL
RSGRTRRAIDVPLIKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLF
RSFKATKFFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTK
ERKKSRFGNAFHLCREVLRLSKLVVDSHVQYRLGNVDAFQLSDGLQYIFAHVGQLTGMYR
YKYKLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWLFFMRGITPLLERWLG
NLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHL
SESWRCWKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCK
KNLGRLTRLYLKAEQERQHNYLKDGPYITAEEAVAIYTTTVHWLESRRFSPIPFPPLSYK
HDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKE
VGIEFMDLYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVY
KWCQGINNLQDVWETTEGECNVMLESRYEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKN
NVVINYKDMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLS
FQDTVTESAHPIRLYCRYIDRIHIFFRFSADEARDLIQRYLTEHPDPNNENIVGYNNKKC
WPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFE
CRILPKCRTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGS
TTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPP
VVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQ
PWESEFIDSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYD
KGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGT
YFPTWEGLFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQV
QLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVFDQELDALEIETVQKET
IHPRKSYKMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDS
HDIERYARAKFLDYTTDNMSIYPSPTGVLIALDLAYNLHSAYGNWFPGGKPLIQQAMAKI
MKANPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKT
FEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLP
VEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQ
MVLFNLYDDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTD
EEWIKVEVQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQT
KEQSQLTATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVS
SDDIKETGYTYILPKNVLKKFICISDLRAQIAGYLYGTSPPDNPQVKEIRCIVMVPQWGT
HQTVHLPNQLPQHEYLKEMEPLGWVHTQPNESPQLSPQDVTTHAKVMADNPSWDGEKTII
ITCSFTPGSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMV
PGQCSWNYNFMGVRHDPNMKYDLQLANPKEFYHEVHRPSHFLNFASLQEGEIYNADREDM
YG
NT seq
7029 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgcattcccatacagaggtgttcctggaacaatgcctccaggtgttcctcca
ccacctcctgctgctgctccaataccagattatatgacagaggagaaactgcaagagaaa
gcccggaaatggcagcagctgcaggcaaagcgctactcggagaagaggaaatttggcttt
gtggacacccagaaagaggacatgccacctgagcatgttcgcaaaatcatcagggatcat
ggtgacatgacgaacaggaaatttcgtcatgacaagagggtctacctcggtgccctgaaa
tatatgccccatgctgtgctcaaactgctggagaacatgcccatgccatgggagcaaatc
agagacgttcctgtcctttaccacattacaggcgccatttcctttgtaaatgaaatccca
tggattatagagccagtgtacattgctcagtggggctcaatgtggatcatgatgcgtcga
gagaagagagacaggcgacacttcaaacgcatgcgtttccctccattcgatgatgaagaa
cctccgttggactacgcagacaacattctggatgtggagcctctagaagcaatccagatg
gaactggacaccgaggaggactcttctgttgtagactggttatatgagcatcaacccctg
aaagattctaacaaatacgtgaacgggaccacatacagacgctggcagttcaccttgcca
atgatgtccactctgtaccgcttggccaatcagctgatgacagatttggtggatgacaac
tacttctacttgtttgacttgaaagcttttttcacctcgaaagctctaaacatggccatt
cctggtggacctaaatttgagccccttgtcagagacattaacctccaggacgaagactgg
aatgaattcaatgacatcaacaagatcatcatcaggcagccagtcaggacagagtacaaa
attgcattcccttacctgtacaacaacctgccacatcatgtgcacctcacatggtaccac
acacccaacgtggtgttcatcaaaactgaggatcctgatctgcctgcattctactttgac
cctctgatcaaccccatctctcacagacactctgtcaaaagccaagagccattgccagat
gacgatgaggagtttgagctacctgagtatcttgagccattcttgaaggagacgcccctc
tacactgacaacacagctaatggcattgcattgctgtgggcgcctcgtccgtttaatctt
agatcaggaagaaccagacgagccattgatgttcctctcatcaaaaactggtatcgtgag
cactgccctgcaggccagcctgtgaaggtgcgtgtgtcctaccaaaagcttctgaagtac
tacgtgcttaacgctttgaaacacagaccccctaaggcacagaagaagagatacctgttc
cgttctttcaaggccaccaaattcttccagtctacaaagctggattgggtagaggttggc
ctccaggtgtgccggcagggctacaacatgctgaacctgctgattcacagaaagaacctg
aactacctgcacttggactacaacttcaacttgaagcctgtcaagaccctcacgacaaag
gaacgcaagaagtccagattcggaaatgcgttccatttgtgccgtgaagttcttcggttg
agcaagcttgtggtggacagccatgtgcagtacagacttggcaacgtcgatgcttttcag
ttgtctgatgggctgcagtacatttttgctcatgtgggtcagctgactggcatgtaccgc
tacaagtacaagctgatgaggcagatcagaatgtgcaaagatttgaagcatctcatctac
taccgcttcaacacaggaccagttgggaaaggtccaggatgtggcttctgggctccagga
tggagagtctggctgttcttcatgagaggcatcacccctcttctggagaggtggcttggc
aaccttctggccaggcaatttgagggtcgacattccaagggtgttgccaagactgtgacc
aaacagcgcgttgagtctcactttgacttggaattgagagctgccgtgatgcacgacatt
ctggacatgatgcctgaaggcatcaaacagaacaaagccaggaccatcctgcagcatctc
agtgagtcatggaggtgctggaaggccaacatcccttggaaggttccaggacttccaacc
cctattgagaacatgatcctccgctacgtgaaggccaaagctgactggtggaccaacacg
gctcactacaaccgtgagagaatcaggcgaggagccactgtggataagacagtgtgcaag
aagaacttgggacgtctcactcgactctacctcaaggcagagcaagagaggcaacataac
tacctgaaggatggtccctacatcacagctgaggaggccgtggccatctacaccaccaca
gtgcactggctggagagtcggcggttctctccaatccccttccctcctctctcatataaa
cacgacactaagctgctcatcttggctctggagagactgaaagaagcttacagtgtgaag
tcgaggctgaaccagtcacagcgtgaggagttgggtctgatcgagcaggcctacgacaac
cctcatgaggctttgtccagaatcaaacgtcacctcctcactcagagagccttcaaagag
gtgggtattgagttcatggacctgtacagtcacctggtaccggtttatgacgttgaacct
ctggagaagatcactgatgcatacttggatcagtacctgtggtatgaagcagacaagcgc
agacttttcccaccctggatcaaaccagctgacacagagcctcctccactactggtatac
aaatggtgccaaggcatcaacaacttgcaggatgtgtgggagacgacagaaggagagtgt
aacgtcatgttggagtctcgctatgaaaagatgtacgagaagattgacttgacgctgctg
aacaggcttctgcgtctcattgtggatcacaacattgctgattacatgacagccaaaaac
aacgttgtcatcaattataaggacatgaatcacaccaactcttacggtatcatccgcggg
ctgcaatttgcctctttcatcgtgcagtactacggacttgtcatggacctgctggtgctg
ggtctgcacagagccagtgagatggctggacctccgcagatgcccaatgatttcctcagc
tttcaggacactgtcaccgagagtgcccatcccattcgcctttactgcagatacatagat
cgtattcacatctttttcaggttctctgctgatgaggcaagagatttgatccagaggtac
ctgactgagcatcccgaccccaacaatgaaaacattgtgggctacaacaataagaaatgc
tggccgcgagatgctagaatgaggctgatgaaacacgatgtgaatttgggccgtgctgtg
ttctgggacatcaagaatcgccttccccgttctgtgaccacagttcagtgggagaacagc
tttgtgtcagtttacagcaaggacaaccctaacctgcttttcaacatgtgtggctttgag
tgtcgcatcttgcccaagtgccgcaccagctatgaggagttcacacacaaagatggtgtc
tggaatttgcagaatgaggtaacaaaagagaggaccgcgcagtgtttcctgcgcgtggac
gatgagtcgatgcagaggttccacaacagagttcgacaaattctgatggcctctgggtcc
acaactttcacaaagattgtgaacaagtggaacaccgctctgattggtctgatgacctac
ttccgtgaagctgtggtcaacacccaggagcttctggaccttttggtgaagtgtgagaac
aaaatccaaactcgtatcaagattgggctgaactccaaaatgcccagtcgtttccctcct
gtggtgttttacacccctaaagagttgggaggactgggaatgctttcaatgggacatgta
ctgattccacagtctgacctgagatggtccaaacagactgacgtgggcatcactcatttc
cgctctggtatgagtcatgaagaagatcagttgattcctaatctgtaccgatacatccag
ccatgggaaagcgagttcattgactcccaaagagtttgggccgaatacgcactcaaacgt
caagaagccattgctcaaaacagacgtttgacactagaggatctggaggactcttgggac
agaggtattcctcgtattaacaccctcttccagaaggacagacacactctggcctatgac
aagggctggagagtcagaacagacttcaagcagtaccaggtgctgaagcaaaatcctttc
tggtggacacaccaacggcatgatggaaaactgtggaatctgaacaactaccgcacggat
atgattcaagcacttggaggagtggagggcattctggagcacactctgttcaagggaacc
tattttcccacctgggagggtctcttctgggagaaggccagtggttttgaggagtccatg
aaatggaagaaactcaccaatgctcagagatctggtctgaaccagattcctaaccgacga
tttactttgtggtggtctcctacaatcaacagagctaatgtatatgtgggtttccaagtg
cagctggacctcactggaatcttcatgcatggtaaaattccaaccctcaagatctctctg
atccagatcttcagagctcacttgtggcagaagattcacgagagcgttgtcatggatctc
tgtcaggtatttgaccaagagctggatgccctggaaatagagactgtccagaaagagacc
atccatcccaggaagtcgtacaaaatgaattcctcctgtgctgacattctgttgtttgcc
tcctacaagtggaacgtctctcgtccttcacttctggcagactcaaaggatgttatggac
agcaccaccacacagaagtactggattgacattcagctcagatggggtgattatgactcc
catgacattgagagatatgccagggccaagtttctggattataccacggacaacatgagt
atttacccatcacccactggtgtcctgattgccttagatctggcatacaacctgcacagt
gcctatggaaattggttccctggaggcaaacctctgatccaacaggccatggcgaagata
atgaaggccaatccggctctgtatgtgctgagagagcgtatccgcaagggtctgcaactc
tactcttcagagcccactgagccttacttgtcctcgcagaactatggagagctcttctcc
aaccagatcatttggtttgtggatgacaccaacgtgtacagagtcaccatccacaagacc
tttgaaggcaacttgaccacgaaaccgatcaatggagccattttcatcttcaaccccaga
actggacagcttttcctgaagattatccacacatctgtatgggcagggcaaaagcgtctt
ggacagctggctaaatggaagactgctgaagaagtggctgctcttatccgatcgctgcct
gttgaagagcagcccaagcagatcattgtaacaaggaagggaatgttggatccacttgag
gtgcacttgctggatttccccaacattgttatcaagggctctgagcttcagctgcctttc
caggcctgtctgaaggtggagaagtttggggacctcattctgaaagccaccgagcctcag
atggttctgttcaatctgtatgatgactggctcaagaccatctcctcttacactgctttc
tctcgtctgatcttaattctgagagcacttcatgtgaacaacgaccgtgccaaagttatc
ctgaagcctgacaagaccaccatcaccgagcctcatcacatctggcccactctgactgat
gaagaatggatcaaagttgaagtgcagctcaaagatctcatcctggctgactatggcaag
aagaacaatgtaaatgtggcatctttgactcagtctgagatcagagatatcatcctgggt
atggagatttccgctccatcccagcaaaggcagcagatagccgagattgagaagcagacc
aaggagcagtctcagctaacggccacacagactcgcacagtcaacaaacacggagatgag
atcatcacctccaccaccagcaactatgagacgcagaccttctcctccaaaactgaatgg
agagttagggccatctctgctgccaacttgcacttacgtaccaaccatatctacgtgtca
tcggatgacatcaaagagacaggctacacttacatcctgcccaagaacgttctgaagaag
ttcatttgtatctcagatctgcgtgctcagattgcagggtatctgtacggaaccagccct
ccagataaccctcaggtgaaggagattcgctgcatagtgatggtgccacaatggggaaca
catcagaccgtccacctccctaaccagctgccacaacatgagtacttaaaggaaatggag
ccccttggatgggtccatacccaacccaatgaatcgccccagctttcccctcaggacgtc
accacccatgcaaaggtcatggctgacaacccatcctgggacggcgagaagaccataatt
attacttgcagttttacaccaggttcctgcactctgacggcctacaagttgactcctagt
ggatatgagtggggcagacaaaatacagataagggtaataaccccaagggttaccttcca
tctcattacgagagagtccagatgctcttgtccgatcgcttcctgggattcttcatggtg
cctggccagtgttcctggaactacaacttcatgggtgttcgccacgatcccaatatgaag
tatgatctacagttggcaaacccgaaagagttctaccatgaggtccaccgaccatctcac
ttcctcaactttgcttcgctgcaggagggtgaaatctacaatgctgaccgtgaagacatg
tatggataa
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integrated database retrieval system
