Triplophysa rosa: 130564964
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Entry
130564964 CDS
T09216
Name
(RefSeq) protein Smaug homolog 2
KO
K27396
protein Smaug
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tros03019
]
130564964
Messenger RNA biogenesis [BR:
tros03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
130564964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
130564964
NCBI-ProteinID:
XP_057207431
LinkDB
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Position
LG14:23360850..23372128
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AA seq
670 aa
AA seq
DB search
MMFRDQVGILTDWFKGWNECEQTVALLSLLKRVSRTQARFLHICLDHWLADCTEIHILEA
EANNAAIVSQWQQEPKEKVVSLLLSHLPLLQPRNTEAKCEYMNLLQKVLSHTIESSLFVE
ESRQLLSYALIHPATTLDDRNSLAMWLNHLEEHLSSRPPPSGPYQHARQGSDEWPGSAES
LEPSYGWQENLPSTCSSPAGQNGHMAFPGMGGVTSPVNSVGNAGSTGLQVQPSPLKPSMS
LTPANQLACSSDWLNQEEGGGCQGGAGAEHAPLSPQSSVASSGSEQTEDQSNTRNTFQED
GSGMKDVPAWLKSLRLHKYASLFSQMTYEEMMILTERHLESQNVTKGARHKIALSIQKLR
ERQSVLKSLEKDILEGGNVRNALQELQQIIITPIKAYSPPTAAQKEVEPGVTPANKAANP
GEETHNPPPCDGESSSAPIYDGDIAGQFTRVMGKVCTQLLVSRPDEENISCYLQLIEKCL
THEAFTETQKKRLLSWKQQVLKLLRLFPRKAVMDSGVYRRGWPAYGSNSLPTAGSVSAGL
GRRAQRPFQMPPRGGAPAPRSMGLMTAGGLTGASPRHSLTSPAAVTAQGRQNLWFGNPGG
SNSMPSQSRSSVQRTHSLPVHTSPHTMLLFQQQECQVPGTDLEINPTLESLCLSMTEHAL
GDGMDRTSTI
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgggatcaagtggggattttgacggactggtttaagggctggaatgagtgc
gagcagacggtggccctgctgtcgttgttgaagcgtgtttcgcgcacacaggccaggttt
ctgcacatctgtctggatcactggttggccgactgtacagagatacacatactggaggcc
gaggccaacaacgcagcgattgtgagccagtggcagcaggagccgaaggagaaagtggtg
tctctcctgctgtctcacctccccctgctgcagccgcgcaacaccgaggccaagtgtgag
tacatgaacctgctgcagaaagtcttgagtcacacaatcgagagcagtctgttcgtggag
gagagccgccagctgctgtcttacgccctcattcaccccgccaccacccttgacgaccga
aactctctcgccatgtggctcaatcacctggaggagcatctgtcgtcgcggccgcccccg
tccggaccgtaccagcatgcccggcagggatcggacgagtggccgggttccgccgagtcc
ctggagccgtcttacggctggcaggagaacctcccgtccacgtgcagctcgccggccggg
cagaacgggcacatggcttttcccggcatgggcggcgtcacctcgcccgtcaatagcgtc
ggcaacgcgggctcaacagggctgcaggtacagccaagcccgctgaagccttccatgtca
ctcacccctgccaatcagctcgcctgcagctctgattggctgaaccaggaggaagggggt
ggatgtcaagggggtgcgggagcagaacacgcccccctgtcaccccagagcagcgttgca
tcgtcggggagcgaacagacggaggatcagagcaacacacgcaatactttccaagaggac
ggcagcggaatgaaagatgtgccggcctggctgaagagtctccgtctgcataaatacgcg
tcacttttctctcagatgacatatgaagaaatgatgattttgacagaacggcacctagag
tcccagaacgtgacgaaaggtgctcggcataagatcgctctgagcatacagaagctcaga
gaacgacagagcgttctgaaatctcttgaaaaggatattctagaaggtggaaacgttcgc
aatgctttacaagaactacagcagatcatcatcacgccaatcaaagcttatagcccgccc
actgctgcccagaaggaggtggagcctggagttacacctgcaaataaagcagccaatccc
ggtgaggagacccacaatcctcctccgtgtgatggagagtcctcctctgcacccatttat
gacggagatattgctggacaattcacacgtgtgatggggaaagtgtgtactcaattgttg
gtctccaggccggatgaggagaacatcagctgttacctgcagctcattgagaagtgtctg
acacatgaggcatttacagagacgcagaagaagaggctgttgtcatggaaacagcaggtc
ctgaagctgctccgcctctttccgaggaaagccgtgatggacagtggagtgtaccggaga
gggtggccggcgtacggctccaactctctgcccacagctggttctgtgagcgcgggtttg
ggccggcgggcacagcgtccgttccagatgcccccgcgtggaggagctcctgccccccgg
agcatgggactgatgactgccggtggtctgacgggagcatcacctcgacactcgctcacc
agccctgcggccgtcacggcgcaagggcgacagaatttgtggtttgggaatccgggcggc
agtaacagcatgccgagccagagcagaagttctgttcagaggactcactcgctgcccgtg
cacacgtctccacacaccatgcttctgtttcaacagcaagaatgccaagtgccaggaaca
gatttggagatcaaccccactctggagtctctgtgcctcagcatgacggagcacgcttta
ggagatggaatggaccgaacgtcaacgatatga
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