Triplophysa rosa: 130565012
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Entry
130565012 CDS
T09216
Symbol
smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4
KO
K06675
structural maintenance of chromosome 4
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tros03036
]
130565012 (smc4)
Chromosome and associated proteins [BR:
tros03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
130565012 (smc4)
Condensin II
130565012 (smc4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_23
AAA_21
AAA_29
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
130565012
NCBI-ProteinID:
XP_057207502
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Position
LG14:397116..431230
Genome browser
AA seq
1291 aa
AA seq
DB search
MPVKTSKSSTAAKRATAPRDESDDELITAGRAASEPPTPPHDVAAGESAEALDNRSLEEI
LSSIPPPPPPAMSSEPGAPRLMITHIVNRNFKSYAGEQILGPFHKRFSCIIGPNGSGKSN
VIDSMLFVFGYRAQKIRSKKLSVLIHSSDIHQDIQSCTVEVHFQKIVDKEGDDYDVMPNS
SFYVSRTAGKDSSSAYHINGKKATFKDVGTLLRSHGIDLDHNRFLILQGEVEQIAMMKPK
GQTEHDEGMLEYLEDIIGSCRLKDPINMLCRRVELLNEQRGEKLNRVKLVEKEKSALEGE
KNKAVDFLTLENDIFKKRSLLCQFYIHDLKQRVSAKEVEKHQIQEDTKDLSEKSSELTDN
MKQKNEELKTVEKKLNKLTKFIESQKEKFTQLDLQDVEVREKLKHTKSKTKKLQKQLQKD
KEKLEEVRSVPASSEQVITETSAQKEELEEKKLQEEQKLAQVMESLKEETSGLQDEKEKR
EQELLELSKAVNETRSRMDVAQSELDIYLSQHNTAVSQLKQAKDALQETVDTLRDRRAAI
KELNVKIPQCEKQLQQDEQELVQISEQDRQKTLLVGDMRQKVAEAKSSLSSNRSRNKVLD
ALMQQKRSGKIPGILGRLGDLGAIDEKYDIAISSSCGSLDNILVDSIDTAQKCVTFLKSQ
NIGVATFIGLDKMKVWEQSMGSISTPENIPRLFDMVRVTDEAVRPAFYFALRDTLVARDL
EQATRVAFQKDKRWRVVTLQGQIIEQAGTMTGGGGRVMKGRMGSSVCADVTQAQLDKMES
ALNKEMTQLQDWQQRKLQLEEKVHRSRCELRDMKNTLEKYSASIQSLAEQELHLKTQMKD
LEANVISAAPDKAKQKQMEKSLETFRRDFQTASSKAGKVEAEVKRLHALIVDINSHKLKA
QQDKLDKINTQLDECSSSITKAQVAIKTAGRNLKKCEESVSQLDKDVGDNETLMEVLTEQ
LKKLEEQAGEIMQTYQQAEEALPEVQEEYRAVVQDIKTLQEQEHALQKESLNVRLKVEHI
DTAITECHNKIKHWEKEAGKLSLHSIDGAPAEELPMLSPDQLQDITNPDVIKNEIALLED
RCANMKPNLGAIAEFKKKEELYLQRVAELDDITTQRDSFKRGCEDLRKRRLHEFMAGFNI
ITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIYNLSGGEKTLSSL
ALVFALHHFKPTPLYFMDEIDAALDFKNVSIVACYIYEQTKNAQFIIISLRNNMFEMADR
LIGIYKTHNTTKNVAINPKTIVLREVETATA
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtaaagacgagcaagagctcaaccgctgctaagagagcgactgcgcctcgggat
gagtcggacgatgagctcatcacagccggcagagccgcgagcgagcccccgacgccaccg
cacgatgttgctgcgggtgagtctgctgaagcgcttgataatcgcagtctggaggagatt
ttgagcagcatccctcctcctccacccccggccatgagctcagagcccggcgctccacgt
ctcatgatcacacacattgtcaacagaaactttaaatcatacgctggcgagcagatcctg
ggcccgtttcataagcgcttctcatgcatcatagggccaaacggcagcgggaaatctaat
gtgatcgactccatgctgtttgtgtttggatacagagctcagaagatccgctcgaagaag
ctgtcggttctgatccacagttctgacatccatcaggatatccagagctgcactgtagag
gtgcactttcagaagatcgttgacaaggaaggagacgactacgacgtcatgcccaacagt
tccttctatgtgtccagaacagctggaaaagatagctcatctgcatatcacatcaacggc
aagaaggcaacgtttaaagatgtgggcacgttactgcgcagccacggcatcgatctggac
cacaaccgcttcctcattctacagggtgaggtggagcagattgctatgatgaagcccaaa
ggtcagacagaacatgatgaagggatgctggagtatctggaggacatcatcggatcgtgt
cgtctcaaagaccccatcaatatgctgtgcagacgcgtggagttactcaatgagcagaga
ggagagaagctgaatcgagtgaagctggtggagaaggagaagagtgctctggagggtgaa
aaaaacaaagctgtggactttctcactttagagaatgacatcttcaagaagagaagctta
ctgtgtcagttctacattcatgatctaaaacagcgcgtgtctgctaaagaagtggagaaa
caccagattcaagaggacaccaaagatctgagtgagaaaagcagtgagctgacagacaac
atgaagcagaagaacgaggagctgaagactgtggagaagaagctgaataaactgaccaag
ttcatcgagagtcagaaggagaagttcactcagctggatctgcaggacgtggaggtgcgc
gagaaactcaaacacaccaagagcaaaactaagaaactgcagaaacagctgcagaaagac
aaagagaagctggaggaggtgaggagcgttcccgccagcagcgagcaggtaatcacggag
acgtccgctcagaaggaagagctggaggagaagaagctgcaggaggagcagaagttagct
caagtgatggagagtctgaaggaggagaccagcggcctgcaggacgagaaggagaagaga
gagcaggagctgctggagttgagtaaagcggtgaatgagacacgctcacgcatggacgtg
gctcagtctgagctggacatctatctgagtcaacacaacactgctgtgagtcagctcaaa
caggccaaagacgccctgcaggagaccgtcgacacgctgagagacagaagagccgccatc
aaagagctgaacgtcaagatacctcagtgtgagaaacagctccagcaggatgagcaggag
ctagtgcagatctcagaacaggaccgacagaagacgttgttagttggtgatatgagacag
aaggtggctgaagctaagagctctctgtccagcaatcgcagccgaaacaaagtgctggac
gccctcatgcagcagaaacgctcaggaaagatcccgggaatcctgggccgcctgggtgat
ctgggtgctatagatgagaaatacgacatcgccatctcctccagctgtggctctcttgat
aatatattagtggactccattgacacggcacagaaatgtgtcaccttcctgaagagccag
aacatcggcgtggccaccttcatcggtctagacaagatgaaagtgtgggagcagagcatg
ggctccatctcgactccagagaacattcctcgtctctttgacatggtccgtgtgacggac
gaggccgtgcgtcccgccttctacttcgccctgagagacacgctggtggccagagatctg
gagcaggccacgcgtgtggcctttcagaaggacaagcgctggagggtggtcacgctgcag
ggtcagatcatcgagcaggccggtaccatgacgggaggaggaggacgagtgatgaaaggt
cgcatgggctcttccgtctgtgccgatgtcactcaggcgcagctggataaaatggagagc
gctctgaataaagagatgacacagctacaggactggcagcagagaaaacttcagctggag
gaaaaagtgcacagatccagatgtgagctgagagacatgaagaatacactggagaaatac
agcgccagcattcagagtctcgcagaacaagaacttcacctcaaaactcagatgaaagat
ctggaagccaatgtcatttcagccgctccggataaagccaagcagaagcagatggagaaa
tctctggagacgttcaggagggacttccagacggcgtccagtaaagcggggaaggtggag
gccgaggtgaagcgactgcacgcgctcatcgtggacatcaacagtcacaagctgaaggcc
cagcaggataaactggacaagatcaacacgcagctggacgaatgctcctcgagcatcact
aaagcccaggtggccatcaagactgctggacgcaatctgaagaagtgtgaggagagcgtg
tctcagctggataaggacgtcggagacaacgagacgctgatggaggtgctgacggagcaa
ctgaagaagctcgaggagcaggctggagagatcatgcagacgtaccagcaagctgaggag
gccctgcctgaggttcaggaggagtatcgggcagtggtgcaggacatcaagactcttcag
gaacaagaacatgctctacagaaagagtctctgaatgtacgactcaaggtggaacacatc
gacacggccatcacagagtgtcacaacaagatcaaacactgggagaaagaggccggtaaa
ctgtcactgcactctattgatggagcaccagcagaagagctgcccatgctgagcccagat
cagctgcaggacatcactaatccagatgtcatcaaaaatgagatcgctctgctggaggac
cgctgtgccaacatgaaacccaacctgggagccatcgcagagttcaagaagaaggaggag
ttgtatctgcagagggtggctgagctggatgacatcaccacacagagagacagtttcaag
agaggctgcgaggatctgcgcaaacggagactgcacgagttcatggccggattcaacatc
atcactaataaactgaaggagaattatcagatgctcacgctgggaggagacgcagagctc
gagctggtggacagtctcgatcccttctctgagggcatcatgttcagtgtgcgtcctcct
aagaagagttggaagaagatctataatctgtctggaggagagaagacgttgagctctctg
gctctggtgtttgctcttcaccacttcaaacccacaccgctgtacttcatggatgagatt
gacgcagcgctggactttaagaacgtctctatcgtggcctgctacatatacgaacaaacc
aagaatgctcaattcatcatcatctctctgaggaacaacatgtttgagatggctgatcgg
ctcattggcatctataagacacacaacaccaccaagaacgtggccatcaaccccaaaact
attgtgctgagagaggtggagaccgcaaccgcgtga
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