Triplophysa rosa: 130565440
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Entry
130565440 CDS
T09216
Symbol
fip1l1a
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
tros
Triplophysa rosa
Pathway
tros03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130565440 (fip1l1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tros03019
]
130565440 (fip1l1a)
Messenger RNA biogenesis [BR:
tros03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
130565440 (fip1l1a)
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GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
130565440
NCBI-ProteinID:
XP_057208141
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Position
LG15:13066645..13102397
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AA seq
461 aa
AA seq
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MSTAEVEKTADESADDETDWLYGDDNFAEEETTEKEVFSALIGDLNGFNGLNCQESESES
DDEVCVTIGDIKTGGSQSLSLGSGSINLNIKTSVSGSKSRALEVDAEGNVLEAAGETFEE
KAWRKPGADLSDYFNYGFNEDTWKVYCDKQRRLRMNLEILSLGSSNKIMVHPNSSDLSEL
SSILSRKSSGSINVIGGQTGTISRVEGRRRHSADENNIQVVSEQSSDTKLPSPKLLPFFP
PNIPPPPFPPPSISIAPPLIPPPPPGFSFPPGAPPPLIPSGRLVGGYDGRSAPPFPFPPG
VYPPPVGMGSWPGAIDSSKPWEYYGHHHKEREREKTRENGQERERERNREADRDKGLSLQ
DRRSEEERPTRHRDHSHYGRERNRESSGRDGESDRRRERRHRDRSERHRFSHSGSSRRRH
DSDDADSHRRHRHKRSRHNHESREPSEEHSMDQENQSEATE
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactgcagaggtagagaaaacagctgacgagagtgctgatgacgagacggactgg
ctttatggagatgacaattttgctgaagaagaaactacagaaaaagaagtcttcagtgct
ctgattggtgatttgaatggttttaatggactcaattgccaggagagtgaatcagaaagt
gacgatgaggtgtgtgttaccatcggcgacattaaaacaggtggatcccagagcttatct
ttagggtccggttccataaatctgaacattaaaacctctgtatcaggcagtaagtccaga
gcactggaagtggacgctgaggggaatgtcctggaggctgctggggagacttttgaagag
aaggcgtggaggaagccaggtgcagatttgtctgactactttaattacggttttaatgag
gacacctggaaggtgtactgtgacaaacagagacgactgcgcatgaacctggagatctta
agcctgggctcttccaacaaaataatggtccatccgaattctagtgatctgtcagaatta
tcatccatcttatccaggaagtcaagcggttctatcaatgttatcggaggacagacgggg
accatcagccgagtggaaggccgaagacgtcacagcgcagatgaaaataacatccaggtg
gtgtctgagcagtcttctgataccaagttaccttccccaaagctgctgcccttctttcct
ccgaatatcccacctccacctttcccccctccctccatcagcattgcgcccccccttata
cccccaccaccccccggtttcagttttcctcctggagctcctccacctttgataccaagt
ggacgtttggttggaggctatgatggacgctcagctcctccgtttcccttccctccaggt
gtatacccacctccagtaggcatgggttcttggcccggtgcaattgacagcagcaagccg
tgggagtattacggccatcatcataaagaaagggagagagagaaaacacgagagaatggg
caagagagggagagagagcgaaacagagaagcagatcgagataaaggtctctctctacaa
gaccgcagaagtgaagaggaacgcccaactcgacacagagatcacagtcattacggcaga
gagaggaatcgagaaagctcaggaagagacggagaaagtgacagacgtcgagagagaaga
cacagagacaggagtgagcgacacagattctcacacagtggcagcagtaggaggcgtcat
gatagcgatgacgcagatagccacaggagacacaggcacaagcgctccagacataaccat
gaaagcagggagcccagcgaggagcacagtatggatcaggagaaccaatcagaagcgaca
gaataa
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