Triplophysa rosa: 130565486
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Entry
130565486 CDS
T09216
Symbol
hmbox1b
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tros03000
]
130565486 (hmbox1b)
Transcription factors [BR:
tros03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
130565486 (hmbox1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
HTH_31
DUF494
HTH_37
Herpes_pp85
HTH_24
Motif
Other DBs
NCBI-GeneID:
130565486
NCBI-ProteinID:
XP_057208203
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Position
LG15:complement(1427307..1435036)
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AA seq
462 aa
AA seq
DB search
MSHYTDEPRFTIEQIDLLQRLRRTGMTKPEILHALDTLERLDREHGDKFGRRGPTDSNAN
NSTTSSTTPTSNTANSAPLATSSTTSTATQTQFPGNLSPSPSNSYAISPPTVLPSPVSLV
AMAQNGRDALAAMPNGKLSPNRYPVNSAAAVRSYGLEASEEDLDVDDKVEELMRRDSTLV
KDEIKAFLGNRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLERTTPG
ATLNMRPAPVALDEMEWRQTPPPINSVTGSFRLRRGSRFTWRKECLAVMESYFSDNQYPD
EAKREEIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIGSFFQEATIL
ENHGIDVQSPGGHSNSDDVDANDYNEQGCDVSYFEKRGANRPFGYYRLEPTSPTQDDAAS
HTDHQDPISLAVEMAAVNHSILALSQPGSVAGEIKTEAIDDD
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtctcactacaccgatgagccgcggttcaccatcgagcagatcgacctgctccagaga
ctgcggcgcacaggcatgaccaaacccgagatcctgcacgccctggacaccctggagcga
ctcgaccgcgagcacggggataaattcggccggcgcggcccgacggactctaacgccaac
aacagtaccacctccagcactacacccacctcaaacaccgctaacagcgcccccctggca
acgtcctccaccacttccacggcgacgcagactcagttccccggtaacctatcgccgtct
cccagcaacagttacgccatttctccacccacggtcttaccctcgccggtctctctggtc
gccatggcgcagaacgggcgggacgctttggcagccatgcccaacgggaagctatctcca
aaccgttacccggtgaacagcgcggcggctgtgaggtcatacgggctggaggcgtcagag
gaggacctggatgtagatgacaaagtggaggagctcatgagacgggacagcacgctggtg
aaagatgaaatcaaagccttcctgggcaacagacgcatctctcaggccgtggtggctcag
gtcacaggcatcagtcagagtcgaatctctcactggcttctccagcagggttcagatctg
agcgaacagaagaaacgcgctttctaccgctggtaccagctcgagaggaccacacctggt
gccacactaaacatgcggcccgcccctgtggcgttggacgagatggaatggcgtcaaacc
cctcctcctataaactccgtcaccggaagcttccgtctgcgcagaggcagtcgattcacc
tggaggaaagaatgtctcgctgtcatggagagttatttcagtgataatcaatatccagat
gaagccaagcgagaggagatcgccaacgcctgcaacgccgtcattcagaaaccaggaaag
aagctgtcagacttagaaagagtcacgtctctaaaagtctacaactggtttgccaaccgt
cgcaaggagatcaagaggcgggctaatatcgggtcttttttccaagaagccacaatcctg
gagaaccacgggatagacgtgcagagtcccggtggacattcgaacagcgacgacgtcgac
gccaacgactacaacgaacagggttgtgatgtttcctattttgaaaagagaggcgcgaac
cggcccttcggttactaccggctggagccaacgtcaccaacacaggatgatgctgccagt
cacacagaccaccaggaccccatctctctcgccgtggagatggcagccgtcaatcacagc
atcctcgccctatcacagcctggaagcgtggccggtgaaatcaagacggaggcaatcgac
gacgactga
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