Triplophysa rosa: 130565527
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Entry
130565527 CDS
T09216
Symbol
hif1ab
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha b isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
tros
Triplophysa rosa
Pathway
tros04137
Mitophagy - animal
tros04140
Autophagy - animal
tros04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130565527 (hif1ab)
04137 Mitophagy - animal
130565527 (hif1ab)
04148 Efferocytosis
130565527 (hif1ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tros03000
]
130565527 (hif1ab)
Transcription factors [BR:
tros03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
130565527 (hif1ab)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
HIF-1a_CTAD
HIF-1
PAS
PAS_4
PAS_9
Rbsn
HLH
Motif
Other DBs
NCBI-GeneID:
130565527
NCBI-ProteinID:
XP_057208291
LinkDB
All DBs
Position
LG15:14337853..14355704
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AA seq
786 aa
AA seq
DB search
MDTGVVTEKKRVSSERRKEKSRDAARCRRGKESEVFYELAHELPLPHNVTSHLDKASIMR
LSMSYLRIRKLLSSSQFPDIDEADKENKLESQLNGFYLKALEGFLLVLSDDGDMVYLSEN
VSKSMGLTQFDLTGHSIFDFSHPCDHEELRDMLVHRTGSKKSKEQNTERSFFLRMKCTLT
SRGRTVNIKSATWKVLHCTGHIRVHETSNDSGDCGFKEPPMTYLVLICEPIPHPSNIEVP
LDSKTFLSRHTLDMKFSYCDERITELMEYEPDDLLNRSVYEYYHALDSDHLTKTHHNLFA
KGQATTSQYRMLAKKGGYVWVETQATVIYNPKNSQPQCIVCVNYVLSGIVEGDVVLSLQQ
TKTEPKAVEKESQEVEDEASEVDVLKLFKSDDLKCSVESSVSLYEKLKEEPEALTRLAPA
AGDTIITLDFNNPESDMQLLKEVPIYNDVMLPSSSEKLPVGLSGLTPAKPTPALTKLENE
AEDFPFNSDSHSGITNSANTPSTSGLCSPGPNSPMDYCFPVYSDINTEFKLDLVEKLFAI
DTEPKTPFTNEDMEDLDLEMLAPYIPMDDDFQLRIPSPLDLLPSGPQSLLAMNSLFQPLP
TPGSPPSVSSGPVKQEPASHAPSPLHLVQEVCSAPVSPFSGSRDASPARSPTPQGGNPLK
RISVTPRELSAKMLAIQNAQRKRKLEEVTSLSEAVGLGALLQSVDSAIEPGKRAKVLEVK
GCSVFGGNKTILILPSDVASRLLSSSFESGGLPQLTRYDCEVNAPVQDRHHLLQGEELLC
ALDQVN
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggatactggagttgtcacggaaaagaaaagggtgagctcggagcgcaggaaggagaag
tccagggatgcagctcgatgtcgcaggggaaaggagtcagaggtgttttacgagctagca
cacgagctccccctgccacacaatgtcacctcccacctggacaaagcctccatcatgagg
ctgtccatgagctacctgcgcataaggaaactgctgagctccagtcagtttccagacatc
gatgaagctgataaggagaacaagctggagagtcagctgaacggtttctatttgaaagcc
ctggagggtttcctcttggtcctctctgatgatggagatatggtttatctctctgagaat
gtcagcaagagcatgggccttacacagtttgatctgaccggtcacagcatctttgacttt
tcacacccatgtgaccatgaggagttgagagatatgctggtccacaggacgggatccaaa
aaatccaaggaacagaacacagagcgaagcttcttcctgcgtatgaagtgcacgctcact
agcagaggccgcactgtcaatatcaagtcggctacatggaaggttcttcactgcacagga
cacatccgtgtgcacgagaccagcaatgactctggagattgtggctttaaagagccccca
atgacctaccttgtgctcatctgtgaacccattcctcatccctcaaacatcgaggttcct
ctggacagcaagaccttcctcagccgccacactctggacatgaagttctcatactgtgat
gagaggatcacagaacttatggaatatgagccagatgatctgctgaacaggtccgtgtat
gagtactatcatgcactggattcagaccacctcaccaaaacacatcacaatctgtttgca
aagggtcaggctaccacaagccaataccgcatgcttgctaagaaaggtggttacgtgtgg
gtggagactcaggccactgtcatctacaaccctaagaattcccaaccacaatgcattgtg
tgcgtcaactatgttcttagtggcatcgtggagggggatgtggttctgtccctgcagcag
accaagaccgagcccaaagctgtggagaaagagagccaagaggttgaagatgaggcctca
gaggtggacgtgctcaaactgttcaagtctgatgatctcaagtgctcagtggagagttct
gtcagcctgtatgaaaagctgaaagaagagcctgaggcactcactcggttggcacctgcg
gcaggagacaccatcatcactctggacttcaacaacccagagtctgacatgcaactgctg
aaggaggtgcccatctacaatgatgtcatgctgccctccagcagtgagaagctgcctgtg
ggtctgtctggtctgacccccgctaagcccaccccagctctcaccaaactggagaatgaa
gcagaggactttcctttcaactctgactctcacagcgggataaccaactccgcaaacaca
ccttccacatctggactctgctcacctgggcccaacagccctatggattactgcttcccg
gtctactcggacatcaatactgaatttaaactcgacctggttgagaaactatttgctatt
gatacagagccaaagaccccttttaccaatgaggacatggaagatctcgatttagagatg
ctagctccatacatcccaatggatgatgacttccagctccgcatcccctctccactggat
ctgctcccctctggccctcaatccttgttggccatgaactccttgttccagcctctacca
acccctggatctccaccatccgtctccagcggtccagtcaagcaggagccagcatcacat
gcgccttcgcccctgcacctggtgcaggaggtgtgcagtgcacccgtctcacccttcagt
ggcagtcgcgacgcttcaccagcacgttcccccaccccacagggaggaaatccgctgaaa
agaatttctgtgactccgcgagagctgtctgcaaagatgctagccattcagaatgcccaa
cgcaagagaaagctggaggaggtgacatcgctttctgaagctgttggactgggcgctttg
cttcagagcgtggacagtgctatagaacctggaaagagggcaaaggttttggaggttaaa
gggtgcagtgtgtttggtggaaacaaaaccatcctcatactgccctcagacgtggccagt
cgtctgttgtccagctcattcgagagcggcgggctgcctcagctaacacgctatgactgt
gaggtcaacgctcctgtccaggaccgtcatcatctgctccagggagaggaactcctgtgt
gctctggaccaagttaactga
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