Triplophysa rosa: 130565562
Help
Entry
130565562 CDS
T09216
Symbol
ddx1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
tros
Triplophysa rosa
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tros03041
]
130565562 (ddx1)
03016 Transfer RNA biogenesis [BR:
tros03016
]
130565562 (ddx1)
Enzymes [BR:
tros01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130565562 (ddx1)
Spliceosome [BR:
tros03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
130565562 (ddx1)
Transfer RNA biogenesis [BR:
tros03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
130565562 (ddx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
SPRY
Helicase_C
ResIII
CMS1
DUF5766
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
130565562
NCBI-ProteinID:
XP_057208361
LinkDB
All DBs
Position
LG15:complement(7561075..7567637)
Genome browser
AA seq
740 aa
AA seq
DB search
MAAYSELGVMAEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPL
IQIVYETLKDLQEGKKGRGAVKTGGAVFNKWQMNPYDRSPAFAIGPDGMCCQSREFKEWH
GCRSTKAVTKGKYYYEVSCHDQGLCRVGWSTSQASLDLGTDKDGFGFGGTGKKSHNKQFD
SYGEEFTMHDVIGCYIDMDKGHLSFSKNGNDLGLAFEIPPQLKTQPFFASCVLKNAELKF
NFGDEPFKNQPKDGFIALSQASDGHVVKSAQTGSAKVSEVKSSSNAPRALIIEPSKELAE
QTLNNVNQFKKYVENPKLRDLLIMGGVAAKEQLSILESGVDIVVGTPGRLDDLISTKKLD
LSQVRFLVLDECDGLLTAGYTDFIMRVYNQIPQVTSDGKRLQVIVCSATLHSFEVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVPVYPKNDKLWEKPGKNHIRTDEVHAKDDTRPGAN
SPEMWSEAIKILKGEYTLKAIKEHKMDQAIIFCRTKIDCDNLEEYFIKHGGGPDKKGHQF
SCVCLHGDRKPNERKYNLEIFKKQDVKFLICTDVAARGIDIRGVPYVINVTLPDEKQNYV
HRIGRVGRADRMGLAISLVAMEKEKVWYHSCPSRGKSCNNTRLKENGGCTIWYNEKELLS
EIEEHLKCTITQCEPDIKVPVDEFDGKVTYGQRRATGGGLYKGHVDILAPTVRELANLER
EAQTSFLHLCYLPNQLFKAF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgtactctgaattgggagtgatggctgaaattgcccaggcagtggaagaaatg
gactggctgctgccaacagacattcaggccgaatctatcccactgattctgggtggagga
gacgtgctcatggcagctgagactggaagtggaaaaactggagcctttagtattccactc
atccaaatagtctatgagacccttaaagacctgcaggagggaaagaagggacgcggtgct
gtaaagacaggaggagcagttttcaataaatggcagatgaacccttatgaccgaagtcct
gcatttgctattggtcctgatggcatgtgttgccagagcagagaatttaaagagtggcat
ggctgccgttccaccaaagcggtcacaaaagggaaatattattatgaggtgtcctgtcac
gatcaagggttgtgcagggtgggctggtccactagccaagcatcactagacttggggacg
gacaaggatggatttggctttgggggaactgggaagaaatctcacaataagcagtttgat
agttatggagaggagttcactatgcatgacgtcatcggttgctacatagatatggacaaa
ggtcatttgtcattttccaaaaatggtaatgatctgggtctggcatttgagatccctcca
cagttaaaaacccagcccttctttgcttcctgtgttttaaagaacgctgaactgaaattc
aacttcggtgatgaacctttcaaaaaccaacctaaagatggctttattgccctgagccag
gcttcagatggccatgtggtcaaatccgcccagacaggcagcgctaaagtgagcgaggtc
aaatccagttccaacgcccctagagctctgatcattgaaccgtctaaagagctggctgaa
caaactcttaacaatgtcaaccagttcaagaaatatgttgagaaccccaaactaagggat
cttctcattatgggaggagtggctgctaaagaacagctctccattttagaaagtggggtt
gatattgtagttgggacccctggcagactggatgatctcatatccacaaagaaactggat
ttatcccaagtccgcttcctggtgctggatgagtgtgacggactcctcacagctggttac
actgacttcattatgagggtctacaatcagatcccccaggtcacctcagatggcaagaga
ctacaggtgatagtttgctctgccacgctgcactcgttcgaagtaaagaagctctcagag
aagatcatgcatttccccacatgggtggatctgaaaggagaagattctgtgccagaaacc
gtccatcacgtggtggtgccagtctaccccaaaaacgacaagctgtgggagaaaccgggc
aagaaccacatcaggactgatgaagttcatgccaaagatgacacacgacctggagccaac
agcccagagatgtggtccgaggccatcaagattcttaaaggagaatacacgctgaaagcc
atcaaagagcataaaatggatcaggccatcatcttttgcaggacaaagatcgactgtgat
aatttggaggagtactttatcaaacacggaggaggcccagacaagaaaggacaccagttc
tcttgtgtttgtcttcacggtgacaggaaaccaaatgagcgcaaatacaacttggagata
ttcaagaaacaggatgtgaagtttctgatttgtaccgatgtggctgctagaggaatagat
atccgcggtgttccgtatgtgataaatgtgactctaccagatgaaaagcagaactacgtt
catcgcattggaagagtcggcagagcagacaggatgggtctggctatttcactggttgct
atggagaaggagaaggtgtggtatcacagttgtcccagcagaggaaaaagctgcaataat
accagactcaaggaaaacggaggatgcactatctggtataatgaaaaagagttgttgtct
gaaatagaggaacatctaaaatgcactatcactcaatgtgaacctgacatcaaagtaccc
gtcgatgagtttgatggaaaagtgacttacggccagcgcagggccacagggggtggtctt
tataagggccatgtggatatattggccccaactgtacgagaactagccaacctggagaga
gaggcacagacatccttccttcatctctgctatctacccaaccagctcttcaaagccttc
taa
DBGET
integrated database retrieval system
