Triplophysa rosa: 130565722
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Entry
130565722 CDS
T09216
Symbol
vps18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
tros
Triplophysa rosa
Pathway
tros04140
Autophagy - animal
tros04148
Efferocytosis
tros05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
130565722 (vps18)
04148 Efferocytosis
130565722 (vps18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
130565722 (vps18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tros04131
]
130565722 (vps18)
Membrane trafficking [BR:
tros04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
130565722 (vps18)
Hops complex
130565722 (vps18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_Vps41
zf-RING_16
zf-C3HC4_2
zf-RING_5
zf_RING_Vps8
zf-ANAPC11
zf-C3H2C3
zf-RING_2
zf-RING_UBOX
zf-rbx1
DUF2229
KNOX2
zf-RING_11
DUF5600
Motif
Other DBs
NCBI-GeneID:
130565722
NCBI-ProteinID:
XP_057208731
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All DBs
Position
LG15:10236295..10241260
Genome browser
AA seq
974 aa
AA seq
DB search
MASILDQYEDSQNMRQHSRVSAANIGITHSGFVNVRLEEEKPIFNKQRIDFTPPEKINHF
SVCNNQLCMSLGKDTLLRIDLGKPDQPNQIELGRKDDSRVHKLFLDPTGSHLVISLTTSE
CVYLNRNTQKVRSLSRWRGHLIESIGWNKFIGSETNTGPILVGTSQGIIFEAEISASEGT
IFNTNPDQYFKQVHTLEEDGKPAPVCCLEVERGMESKYLIVATTRKRLFQFVGKLAEGSE
QQGFSSLFAQNQDLLPSFQEFPVNMGYSEITFYTSKLRSCPKSFAWMMGNGVLYGQLDFV
RPDSLLSDVQVWEYTPDIDLNFVKPISIVLTQFHFLLLLPDRVRGICTLNGQVVHEDVFP
EKFGALKKMIKDPVTGLVWIYTEKAVFRYHIQREARDVWQMYMNMNKFDLAKEYCKDRPE
CLDMVLAKEAEHCFQNKHYLESAKCYALTQNYFEEIALKFIEAKQEDALKEFLIKKLNNL
KPSEKTQITLLATWLTELYLNRLGQLEAEDGKQHVFQETREEFRSFLKSPKHKDCFYNNR
NTIYDLLASHGDVDNMVYFSVIMQDYERVISHYCQHDDYSAALEVLSKHCDDRLFYKFSP
VLMQHIPKKVVDAWIKMGHRLDPKNLIPALVNYSQMGSMQQINETIRYMEFCVYQMDVKD
EAIHNYLLSLYAKHKPDALLWYLEQAGTHASDIHYDLKYALRLCSEHGYLQACVLVYKIM
ELYEEAVDLALQVDVDLAKSCADLPEDDEELRKKLWLKIARHVVQEEKDVKKAMNCLSSC
NLLKIEDILPFFPDFVTIDHFKEAICNSLEEYNKHIQELKQEMDEATESAKRIREDIQEM
RNKYGVVDSQEKCATCDFPLLNRPFYLFLCGHMFHNDCLLQEVIPNLSGYKQNKLEELQK
KLAATTQTTKSRHRPKEEDTVSLGKGQGSREQIKSDIDDIVASECVYCGELMIKSIDKPF
IDPSNFDQEMSSWL
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggcctctattcttgatcaatatgaagattcacagaacatgcgtcagcacagtcgcgtg
tccgcggccaacattggcattactcattcagggtttgtgaatgtcaggttagaggaagag
aaacccattttcaacaagcagcgcatcgacttcacacctcccgaaaaaatcaaccacttc
tcagtgtgcaacaaccagttatgtatgagcctggggaaggacaccctactgagaattgat
ctgggaaaacctgatcagccaaaccagattgaactgggaagaaaggatgacagcagagtg
cacaaactttttctggatcctactgggtcacatttggtcattagcctgactacaagtgaa
tgcgtatacctaaacagaaacactcagaaggttcgaagtctatctcgatggaggggccat
ttgatagaaagcataggctggaacaaatttataggctctgagaccaacacagggccgatt
ctggttggcaccagccagggcattatcttcgaagcagagatctctgcttcagagggcact
attttcaataccaacccagaccagtacttcaaacaggttcacaccctggaggaggatggt
aagccggcaccagtttgttgccttgaggtggaacgtggcatggaatcaaaatacttaatt
gttgccaccacgcgaaaacgtctgtttcagtttgtaggaaagttggcagagggctctgag
cagcaggggttcagctccctctttgcccagaatcaggaccttttacccagcttccaggag
ttccctgttaatatggggtacagtgagattactttctacacgtcgaagcttcgcagttgc
cccaagagctttgcctggatgatgggtaatggggttttgtacggacagttggatttcgtg
cggcctgactctctacttagcgacgttcaggtgtgggaatacacaccggatattgattta
aactttgtcaagccgatatctatagtactcacccaatttcatttcctgcttttgcttcct
gaccgtgtgagagggatctgcactttaaatgggcaggtggtgcatgaagacgtgttcccg
gaaaaatttggcgccctaaaaaagatgatcaaagatcccgtaacagggctcgtgtggatt
tataccgaaaaagcagtctttcgctaccacatacagagagaagccagagacgtttggcag
atgtacatgaacatgaataagtttgatctggctaaagagtactgtaaagatcgaccagaa
tgtctagatatggtactagccaaagaagcggaacactgcttccagaacaaacactaccta
gaaagtgcaaagtgttatgcactcacgcagaattactttgaggagattgcattgaagttc
attgaagccaagcaggaggacgccttaaaagagtttttgattaagaagttaaacaacctg
aaacccagtgagaagactcagatcacgctgctggcgacctggctgaccgaattatatctc
aaccggcttggtcagctggaggctgaagatggcaagcaacacgtgtttcaggaaacccgc
gaagagttccgctcctttcttaaaagccccaagcataaggattgcttttataataatcgc
aataccatctatgatctgcttgccagtcatggtgatgtggacaacatggtgtatttttct
gttatcatgcaggactatgagcgggttatatcacattactgccagcatgacgactatagt
gccgccttagaggtcctttcaaagcactgtgatgaccggctcttctacaagttctctccg
gttctcatgcagcacattcccaaaaaggtggtagatgcatggattaagatgggacaccgg
ttggatccaaagaatttgattccagcgttagtgaactacagccagatggggagtatgcaa
cagatcaacgaaactatccgttacatggagttctgtgtgtatcagatggacgtcaaagat
gaggccattcacaattacttactctcactatatgccaaacacaagcctgacgccctgtta
tggtaccttgaacaagcgggaacacatgcctcagacattcactacgatttgaaatatgcc
ttgcgtctttgttctgaacatggttatcttcaggcctgtgtgttagtttacaaaatcatg
gagctttatgaggaagctgtggaccttgcattacaagtggatgtcgatttggccaagtct
tgcgctgatcttccagaagatgacgaagaactgaggaagaagctttggctgaagatcgct
cgtcatgtggttcaggaagagaaggatgtaaagaaggccatgaactgtctgtccagttgc
aacctgcttaagatcgaagacatcttgcctttctttccagactttgttacaatagatcat
tttaaagaggctatttgcaactctttggaggagtacaacaagcacattcaggagcttaaa
caagaaatggacgaggccacagaaagtgccaaacgtatccgcgaagacatccaggagatg
cggaacaaatacggggtggtggactcgcaggaaaaatgtgccacttgcgatttccccttg
ctcaatcgacctttctatctctttctgtgtggacacatgttccataatgattgcctcctt
caggaagtcatccctaacctctctggctacaagcagaataaactggaggagcttcagaag
aagctggcagcgaccacacagaccaccaaatctagacacaggcccaaggaagaggatacg
gttagtctgggcaagggccagggaagcagagagcagatcaagtcagatattgatgacatc
gtagcttccgagtgtgtctactgtggtgagctgatgatcaaatcgatcgacaagcctttc
atagatccatctaatttcgatcaagagatgtccagctggctctga
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