Triplophysa rosa: 130565748
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Entry
130565748 CDS
T09216
Symbol
zgc:163098
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
KO
K12842
U2-associated protein SR140
Organism
tros
Triplophysa rosa
Pathway
tros03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tros00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130565748 (zgc:163098)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tros03041
]
130565748 (zgc:163098)
Spliceosome [BR:
tros03041
]
Complex A
U2 snRNP components
U2 related factors
130565748 (zgc:163098)
Complex B
130565748 (zgc:163098)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Surp
RRM_1
CID
cwf21
CTK3
RRM_7
SET_assoc
Motif
Other DBs
NCBI-GeneID:
130565748
NCBI-ProteinID:
XP_057208774
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Position
LG2:complement(19345336..19372288)
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AA seq
894 aa
AA seq
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MADKKGKSVGVKRTLTKREQEEIKKKEEEKAAEVFEEFLASFDSNDKSNVKTFVRGGIVN
ATKEEEAAEVKKSKLYRPVTKFTPPSPNASPAPSADIRKTAAKKKVEEKKKSNLELFKEE
LKQIQEEREERYKRKKGDSGGVHPDVDLPLTRRSSTHEKHTVYNHFKDLVGNKTTSCIVF
VVFDDDPAVPNTTNLYIGCINPKMTEEMLCKEFGKYGPLASVKIMWPRTEEERTRVTNRG
FVAFMTRKDAERALAALDGKTIMGFEMKLGWGKAVRIPPQPLYTPIGVLKTTAPPPPSGL
PFNAQPRDRFRNDFTKSRSRSQEDFYKTLSEAVVTVVIPPERNLLGLIHRMIEFVVREGP
MFEAIIMSREKSNPDFRFLFENKSQEHVYYRWKLYSILQGENPNKWRTTSFRMFRGGSLW
KPPILTPYLHGDEDAEESSFSIQEEEPKKGQLKAEHRERLESLLRGLTPRRDEIGDVMLF
CLERAEAAEEVVSCITEALSLLHTPLQKKIARLYLISDILYNSCAKVANASYYRKFFETK
LPEIFGDLSESYRNIQARLQAEQFKQRIMGCFRAWEDWAIYPDSFLIQLQNIFLGLIKPG
EEVIDRPEPGSPDLDGAPLDGVPIERSEIDGMPLDDLDGSPLTWDPASIDGVPVDDIDGV
PLENPIDDIDGVPLDEKSLPSVALSKWEKVEDTESSAKNDSELNSSGLKENEGDSDMSSD
DADSPSRFEGAEFKSSLKNFELSESKRTHLRELEVKVMKFQDELESEKRQRKSSMSLQQQ
VQHYRNRLLQKEFDKDNLEKRDKWSQKPKERPKKDERRDKGEDRSKTRDKEKSRKSEDRE
RSRGRSRDKDDRRERTRSRSPKKSKRSPSPQHKSWSSSSRSPHRSHKKSKKSKH
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaaaaaagggaaatctgtgggggtgaagaggacactaacaaaaagagaacag
gaggaaatcaagaaaaaggaggaggagaaagctgccgaagtctttgaagaatttttagct
tcttttgactctaatgacaagagtaatgtgaagacttttgtacgtggtggtattgtgaat
gcaactaaagaggaagaagctgcggaggtgaagaagagcaaactctacagacccgtcact
aaattcactcctccgtctccgaatgcctctcctgctccatctgcagacattagaaaaaca
gccgctaaaaagaaagtggaggagaagaagaagagtaatctggagctttttaaagaagag
ctgaaacaaatacaagaggaaagagaagagagatacaaaagaaagaaaggagactctgga
ggagtgcatcctgatgtggatttacctttgacgcgacgatcaagtacgcatgagaaacat
acagtttacaatcactttaaagatctagtgggaaataaaacgacttcatgcattgtcttt
gtagtattcgacgatgatcctgcagtgccaaacacaacaaacctgtacatcggctgcatc
aaccccaagatgacggaggagatgctctgtaaagagtttggcaaatacggccctcttgcc
agcgtgaagattatgtggcctcgcacagaggaagagagaactagggtcaccaaccgcggt
tttgttgccttcatgacacgaaaagatgcagaacgtgctttggctgccctggatggtaag
acgataatgggttttgaaatgaagttgggttgggggaaagcagtacgcattcccccgcag
cctctttatactcccattggtgtgctgaagaccacagccccccctccaccatctggactg
ccattcaatgcccaacccagagaccgcttcaggaatgacttcaccaaatcccgaagccgc
tcgcaggaagacttttacaagactctgtccgaggccgtagtgacagtggtaatcccccca
gaaaggaacctgctgggcttgatacacagaatgattgagtttgtggtgagagagggaccc
atgtttgaggccatcatcatgagccgggagaagagcaaccctgactttaggtttttgttt
gaaaacaagagtcaggagcatgtgtactacagatggaagctgtattctattctacagggc
gaaaacccaaataaatggagaacgacatctttcagaatgtttaggggtggctcgttgtgg
aagcctcccattcttaccccatatctccatggagatgaggatgcagaagagagctccttc
tctattcaagaagaagagccaaagaaagggcagctgaaggcagaacacagagagaggtta
gagtccctgctgagaggtctgactccacgcagagatgagatcggagatgtgatgctgttc
tgtctggagagagcagaggctgcggaggaggtcgtctcctgcatcacagaggctctgtca
ctactgcacacgccactacagaagaagattgccagactttacctgatatctgacatcctc
tacaactcctgtgccaaagttgccaatgcatcatattaccgcaaattttttgagacaaag
ctgcctgagatatttggggacttgagtgaatcatatcggaacatccaggccagactccag
gcagagcagtttaagcaaaggatcatgggatgtttccgtgcgtgggaggactgggcaatt
tatccagattccttcctgatccaactgcagaatatattcctggggctcattaaacctgga
gaggaggtgattgacaggccggagcctggatctccagacctggatggggcacctttggat
ggtgttcctatagaaagaagtgaaattgatggaatgccccttgatgaccttgatggctca
cccttaacctgggatccagcctccatcgatggagtaccggttgatgacattgatggtgtt
cctctggaaaacccaatagatgacatcgatggcgtgcctttggatgaaaagtctttaccc
agtgttgcactgtctaaatgggagaaggtggaagatacagagtcatcagcaaagaatgac
tctgagctgaactcaagcggccttaaagagaatgaaggtgattctgacatgagcagcgat
gatgctgacagtcccagcaggttcgagggggcagagtttaagtcttctttgaaaaacttt
gagctgtctgaaagcaaaaggacacacctccgagagctggaggtgaaggtgatgaagttt
caggatgaactagagtctgagaagagacaaaggaagtccagtatgagtcttcaacaacaa
gttcagcactacagaaaccgactattacagaaggagtttgataaggacaacctagaaaag
agagacaaatggtcacagaaaccgaaagaaaggcccaaaaaagacgagcggagagataaa
ggggaggacaggagtaaaacacgggataaagagaagagtagaaagagtgaagacagagag
aggagtaggggacggagtcgagacaaagacgacaggagagagagaacaagatctcgatca
ccgaaaaagtccaagcgatcgccgtctccgcagcacaaatcctggagttcatcatcccga
tcaccacatcgctcacacaaaaagtccaagaagagcaaacactga
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